| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3469 |
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| Symbol | |
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| ID | 5735330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 4368087 |
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| End bp | 4371572 |
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| Gene Length | 3486 bp |
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| Protein Length | 1161 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641280616 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001546233 |
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| Protein GI | 159899986 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGGAT GGATTTTTGT CATTTTGTTG TGTGGGCTAT TTGGCTATAA CTTGTATCGC
ACTGGCCATG TGCAGCGCTT GATTGCAATT CGCCAGCGCC GCCCATCTGC CCGCCCGACT
GGCGCAATTG CTCCAACCCT ACGTGCCCGC GATTTGCGCA CCCAGCGCTC GTGGGCAGTC
CGCATTCGTG ATGAAGTTCA ATCGCGCGGC AATATGGGCG TGGTTATTTT CTTCCTGATT
ATCTTAATTG CTTTTTTTCT GAGTTTGAAC TTACTGGGCT TTTGGGGTAG TCAACCGACT
GAAACTGTTC GGGCACGGGT AATTCTCTCA CCATTTACCA GCAGCGCAGG CCAACCAGCC
CAAGAAGGTT TTGCCGCAGC CACCACCATG GCCCAGGCTT GGCAAGCTCG TGCTAATGAT
TTGCAATTTG CTGTGCTCAA AACCCCAATT GCCGATGCCC AAAGTGCTTG GAATTTAGCC
GATCGGCCCA AATATGATCT GGTGATTTGG GGCACAATTG TCGCTGGCGG TGATGCCAAT
AGCGCTAGCA TCGAGCCGCA ATTGCTCTGG ACTCCACGCC AACCCTTGCC GCATGATCGC
TCGTTGGGGT TACGCGAACG CTTGAGTTTA CCACTCGTAT ATCGTTTGGC CGACCAGCCA
TTTAATGCCC AAGCCGTGCT CGGTGAAATT TTGGTCGTGA TCGATCTCTA TCAAATGGGC
GAGTACGATC AAGCGATCCA AGCGATCAAT AGTTTGCTTG ATCGCTATGC CGTGGATGGG
CCGTTACGCC CCGATTTGCT CTTGGGGATT CGTGGCTCGA TTGCCGCCCT GCAAGAGCAA
TGGAGCTTAG CCGAGGGTGA TTTTCGGCGA GCCTTAGAAA CTGCCGATAA ACCTGAATAT
TGGAATAACC TTGGGGTTGT GTTGCTAGAA CAAGGCCGTT TTTCTGAGGC AACTCAAGCC
TTCAACACTG CTCAAGAACG CCTCAAAGGC ACAAATAGCG ATCTTACGGC GCTGCATTTG
AATCGTGGTT TGTTGGCGTT ACGTGGGGTT GACCCAGCGG TAGCGGTTGG TGAGTTGGCC
TTAGCGGTCA AGCTCAATCC TAATGGCATC AGCAACAAAT TAGCCTTGGT CGAGGCTCAA
TTACAAGCGA ATCAATTGGC GCAGGCGATC GAAACCATCA ATAATCTGAA TGGCTATGCG
AACGCTGATC CGTTGGTTCA ATTGATGACA GCGCGGGTTC AAGTAGCCCA GTTGGTCAAC
AATGGCGATC AGCCGCTGTG GGAATTGGAG ATTGTGCCGC CATTGCCTCG CGAAACCCTG
ACGATTGTGC GCCAACGGCT TGATAGTGCG GTTGTTACAC TTGAAACGAT TTCGATCGAG
CAACGCCAAA TTGCCGCCCG TGATGATGCA GCAGGCTTGC CAGAATCAGG GCGGGTGCAC
GAAGCTCATT CGCGCCAAGC CTTTGAATTG CTCAATCAGG TGCGCTATTG GCAAGCGGTC
GCGATGACCG AAGAGGGTAT TTCAGCCTCG CTTGAGCAAA AAGGTCGGCT GCGCAGCATG
TGGGATGGCA TGTTTGGCGA TGATTCTCCG CTGGAATTAG CCCAAAATGT GATCGATCCA
CTCGCCAAAG CCCAAGACCA GAATTATCCA ATTTTAATTC AGGCAGGGCG GGTGCATCGA
ATTTTGGGTG CGCCAAAAAC AGCTATGGAT TACTACACCA AAGCCAGCGA ACTCAATGCC
AATCGGCCTG AGGGCTGGTA TGGCTTGGCA ATCACGCGCT TTAATACCGA AGGCCCAAGC
CCAGAACGCA ACCAAGCAGT GCGTGATTAT TTGCAAAAAA CCATTGCTGC CGCCCCAAAT
TTTACGCCTG GCTATATTTT GGCTGCTCGC TTAGAGGTTA GCGATAAACA ATGGGCCGCC
GCCTTGCCCT ATCTACAATG GATTGTGGCT AATCGCCCTG ATAACCTTGG GGCACGGATT
ACCCTGGGCA CAGCTCAACG CGAGCTTGGG GCTTTGGCCG ATGCTGAAGT GACGCTTTTG
CCTTTGGCGA ATGCGAATAA CAGCCAAGCC TTAGTTGAAT TAGGCAAAGT CTATGCCCAA
GCAGGCCAAG ATCAATCGGC TGAAGATATC TTCTTGCGGG CATTGAATGT TGATAGCAGC
AATGCTAGCG CTGCTTATGA GATTGGCCGC TTGCGCCAAA ACCGTGGCGA TTATGCAGGA
GCCGAAAAAG CCTATCAAGT TGCAACTGAA ATTAATACCA GCTACGTTGA GGCGCATCTC
GCATTAGGCC AATTGTATGC GCGGTATCTC GACCAGCCAG ATAATGCCGT TGCGGCCTAT
CAACGCGCAA TCGACGCTGG CGGCGAAGAT CCACGCAATT TCGAGGATAT GGGCCGCGAA
TTTTTGGAGA TTGGGCGTTA TAGCGAGGCC GCCGATGCCT TGGAACAATC GGTGCGGCTC
AATCCGAATG TGCCTGAATC ACGCCATTAT TTGGCCCAAG CCTACCTTGA GCAAGGTCGT
TTTGAAGCAG CTCGCGAGCA AGAACGCGCA GCGATTGCCC GTGATGCTGA TGGCGTGTAC
ATCGAAGCGC AGCTTGGCAT AGCCGAGAGT TTTCGGCGCG AACGGCGGTT TGATGAGGCA
ATTACAGCCT ACAACGAAAT TTTGGATAAC GATTCGACGA TCATTCCTGC TTACATTGGT
TTAGGCCGTA CTGCCGCCGA TCGGGGCGAG TGGCAAGTGG CGATTGGCTA TTATAATCAA
GCCCTCGCCC GCGAACCCAA TAGCACCAAC GCCCATTTTT GGCTGGGCCA GGCCTTGGTC
GAGCAAGGTT TCTATGAACG GGCACTTGAT GAATTTAATT TGGTGCTAGC GACCGATCCA
AATAATGCCG AAGCCTTGTT TGGGGCTGGT CGGGCTTATT GCAACATGGC GATTAACAGC
TATGCCTATG ACCCAGCACA AGCTGCCGAA TACGATGCTG AGGCGCGGCG TTTGCTTGAT
CGAGCTTTGA ATTATCGGCC AAACGATGCG CGGGCCTTGT TTGAGCGCGG CAAACTCAAC
GAGCGCCAAA ACCAAATGGC CGCCGCGATT AGCGATTATG GTCGGGCCGC CCAATTGGAT
GCGCAAAATA GCGAAGCATT ATATTTGCAA GGCAAGCTCT ATCTCAGCCA AAACAACCTA
CAAGCAGCCG AAGAAGCGCT TGATCAATCG GTGCGGCGCA ACCAAAATGA CCCAACCGCC
TTATATTGGC TTGGTCGAAC CTATCGCGCC CAAAACCGCA CCAATGATGC AATTAAATCG
TTTGAACGAG CCTTGAGTTT GAATGGCAAT TTTCATGAAG CCCGCTACTA CCAAGGCCTA
ACTGCCGAAG AAGCCAACCA AATCGATCTA GCGCGTGAAG CCTATCACTT AATCAGCCAA
CAAGCCAGCC CCGATGATCG TTGGCGCTTA CAAGCCGAAG AACGTCTGCG CGATTTAGGT
CAGTAG
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| Protein sequence | MIGWIFVILL CGLFGYNLYR TGHVQRLIAI RQRRPSARPT GAIAPTLRAR DLRTQRSWAV
RIRDEVQSRG NMGVVIFFLI ILIAFFLSLN LLGFWGSQPT ETVRARVILS PFTSSAGQPA
QEGFAAATTM AQAWQARAND LQFAVLKTPI ADAQSAWNLA DRPKYDLVIW GTIVAGGDAN
SASIEPQLLW TPRQPLPHDR SLGLRERLSL PLVYRLADQP FNAQAVLGEI LVVIDLYQMG
EYDQAIQAIN SLLDRYAVDG PLRPDLLLGI RGSIAALQEQ WSLAEGDFRR ALETADKPEY
WNNLGVVLLE QGRFSEATQA FNTAQERLKG TNSDLTALHL NRGLLALRGV DPAVAVGELA
LAVKLNPNGI SNKLALVEAQ LQANQLAQAI ETINNLNGYA NADPLVQLMT ARVQVAQLVN
NGDQPLWELE IVPPLPRETL TIVRQRLDSA VVTLETISIE QRQIAARDDA AGLPESGRVH
EAHSRQAFEL LNQVRYWQAV AMTEEGISAS LEQKGRLRSM WDGMFGDDSP LELAQNVIDP
LAKAQDQNYP ILIQAGRVHR ILGAPKTAMD YYTKASELNA NRPEGWYGLA ITRFNTEGPS
PERNQAVRDY LQKTIAAAPN FTPGYILAAR LEVSDKQWAA ALPYLQWIVA NRPDNLGARI
TLGTAQRELG ALADAEVTLL PLANANNSQA LVELGKVYAQ AGQDQSAEDI FLRALNVDSS
NASAAYEIGR LRQNRGDYAG AEKAYQVATE INTSYVEAHL ALGQLYARYL DQPDNAVAAY
QRAIDAGGED PRNFEDMGRE FLEIGRYSEA ADALEQSVRL NPNVPESRHY LAQAYLEQGR
FEAAREQERA AIARDADGVY IEAQLGIAES FRRERRFDEA ITAYNEILDN DSTIIPAYIG
LGRTAADRGE WQVAIGYYNQ ALAREPNSTN AHFWLGQALV EQGFYERALD EFNLVLATDP
NNAEALFGAG RAYCNMAINS YAYDPAQAAE YDAEARRLLD RALNYRPNDA RALFERGKLN
ERQNQMAAAI SDYGRAAQLD AQNSEALYLQ GKLYLSQNNL QAAEEALDQS VRRNQNDPTA
LYWLGRTYRA QNRTNDAIKS FERALSLNGN FHEARYYQGL TAEEANQIDL AREAYHLISQ
QASPDDRWRL QAEERLRDLG Q
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