Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_3442 |
Symbol | |
ID | 5735303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 4329931 |
End bp | 4330959 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641280589 |
Product | anti-sigma-factor antagonist |
Protein accession | YP_001546206 |
Protein GI | 159899959 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCCGATT CAAAGCAGCT ACCCGTCGAA CGTGCCAAAT TGTATGCACG AATTATGCTC GGCATTACCG CCTTGTTTTT GCCAATTTCA ATTTTTGATT GGGCCAATGT TCAATCACAA ATTAATTTCT ATGTGGCGAT TGTCCATGGA TTATTAATTG TTGGCTATAT GTTCCTACTC AAGCCAAACA ATTTATATCC ATTAACGTTC GTATTGCATT TTGCTAGTTC GATTACTGTA GCCGTGGTCA ATCATAATAT TGGTGGTTTT GTATCGTATA ATTTTGCGAT TATTTGTATT GAGTTAATGG GCACAGGTTT CATTTTGGGG CGGGCACGCT GGATTATTGC TGCAACAGCA ATGAGTATTA TCATTCATTT GATTGCAATT ATCAATGAAA TTACGCTTTT TTGGAGCTTT AGCGATCCCA ATTCGCTGAT CATGATGAGT GTCAGTGATA ATTATAAATA TCTTGCCATC GTTTCACAAA CAATTTTATT ACTTGGTACC GGCGCAATTA TCACTATTTT GACCCACGTC ATTAATCAAC GTGAATATGA ATTAGAACAA TCGCGCCAAG CAATGCAGCA ACGCTCCGAC GAACTAGCCG CCTTGGCGAT TCGGCTGGAA ACCTCGAATC AACAATTAGT TTCAACCGAA ACAACACTGC GCCAAACGGT TGATGCCTTG ACTGTGGCGG CCTTGCCCGT CGGCGATGAT GTGGTGGTGC TGCCGTTAAT CGGAGGCTTC GATACCCAAC GCGCCAAAGC GGTGGAAGAT TCCTTGCTAA GCTATATTCA CGAACAACGG GCAAATACCT TAATTCTCGA TTTAACCAGC GTTCTGGTAG CATCCGATAG CTTGCTGACC ATGCTTGAAC GAATTATCCA AGGGGCAAAA TTATTAGGCA CGCGGGTGAT TTTGGCTGGA TTACAACCCG AAGTAGCTCC AATGATGGTA CAGTTAAAGC TCAACCGCCA AACCGTGCTG TCAGCACCGA CCTTGGCGGC AGCCTTAGAA CTTCGCTAA
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Protein sequence | MPDSKQLPVE RAKLYARIML GITALFLPIS IFDWANVQSQ INFYVAIVHG LLIVGYMFLL KPNNLYPLTF VLHFASSITV AVVNHNIGGF VSYNFAIICI ELMGTGFILG RARWIIAATA MSIIIHLIAI INEITLFWSF SDPNSLIMMS VSDNYKYLAI VSQTILLLGT GAIITILTHV INQREYELEQ SRQAMQQRSD ELAALAIRLE TSNQQLVSTE TTLRQTVDAL TVAALPVGDD VVVLPLIGGF DTQRAKAVED SLLSYIHEQR ANTLILDLTS VLVASDSLLT MLERIIQGAK LLGTRVILAG LQPEVAPMMV QLKLNRQTVL SAPTLAAALE LR
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