| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3405 |
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| Symbol | |
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| ID | 5735266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 4288034 |
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| End bp | 4289704 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641280552 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001546169 |
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| Protein GI | 159899922 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.873446 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCCCT TTAATCAACC AGCCCCACAA CTTGGCAATC AATATAGCGA TGATCGTCTA
CTCCAGCTTT ATCTCCGCCG CCGCCTACCC GCCGATGTCC TTAGCCAAAT CAAACCTGCG
CTGCAAACAA TCGGCGATTT AGCTGGCAAC GAATTGTATC AGTTGCAATT GGCTGATCGT
TTGAATGAGC CGCAATTAAC CCAATGGGAT GCCTGGGGCG AGCGGATTGA TCAGATTGTA
TTGACCCCGC TCTGGCAACG TGCCGAGCAA ATCGCTGCCA GTTATGGCTT GATTGCCACG
GCCTACGAGC AAACCTTCCA TGAATATTCG CGTACCTGCC AATTTGCTTT AGCCTATCTC
TTCCATCCAT CGAGCGATGT GTATAGCTGC CCCTTGGCGA TGACTGACGG CGCTGCCCGA
ACCTTGCTCC AAGCGGGCAA TCAGGCCTTG ATCGAACGAG CCATACCGCA TTTAATTAGC
CGCGATCCCG ACCAATTTTG GACGAGCGGC CAGTGGATGA CCGAATCGAC TGGCGGTTCA
GATGTTGGGC TTTCGGAAAC GATCGCCCGC CAAGCCGAGG ATGGTACTTG GCGTTTGTAT
GGCCGCAAGT GGTTTAGCTC GGCTACAACC TCGCAAATGG CCTTGACTTT GGCGCGACCA
GAGGGCAATC CCGCTGGTGG GCGTGGTTTG GCTTTGTTCT ACGTCGAAAC CCGCGATCAA
CGCGGGCGGC TCACTCAGAT CGAAGTTAAT CGGCTCAAGG ATAAATTGGG TACGCGCAAA
GTACCGACGG CTGAGCTGAA TCTGCTTGGC ACACCAGCAA TTCCGGTGCA AGGCTTGCGC
GATGGTGTGC GTGCGATTGT GCCGATGTTG CAAATTACCC GCACTTGGAA CAGCGTTTCA
GCAGTGGGCT TTATGCGACG TGGCATGGCG CTCGCCCAAG ATTATGCCCA AAAACGCTGG
GCTTTTGGCT CATTGCTCAA TCAAAAACCA CTGCATGTCG ATACCTTGGC TGGTTTGCAG
GCTGAGTATG CTGGGGCGTT CCTGCTGACC TTTTATTTAA TCGAATTATT GGGCTTAGAT
GAAACTGGCC GAAGCACGCC CCAACAACGA CAATTATTAA GATTATTAAC ATCTATTGCC
AAATTGACCA CCGCTCGCCA AGCAGTAAAC CATACCAGCG AGATTATTGA GAGTTTTGGT
GGGGCGGGCT ATGTTGAGGA TACAGGCTTG CCCAGCTTGC TGCGTGATGC GCAAGTGCTT
TCGATTTGGG AAGGCACGAC CAATGTTTTA GCGCTTGACA GCCTACGAGC ACTTAGCGAA
GATCCTGGCA TTTGGCCCGT ATTGCGTGAA CAAGTCAATT TGTGGCTGAG CAATGCTCAT
GATCCAAGCC TCAGCCAAGC GATTGTGGTG GTCCAAACTG CGCTTGATCG ATGTGAACAA
TGGCTCGCTG AAAGTAGCAA TGATCGTAGT GTTGCTGAAA TGGGGGCACG GCGTTGGGCA
TTAACCCTTG GGCGAGCATT GGAATTGGCG TTGTTAATCG AACATGCCCA AGCCGCCTTG
ATTGCCCCGA ATGATCGTTG GTTGGCGGCA GCAGCCCGCC GGTTTAGTTG TAGCGCAGTT
AATTTAATTG CCACAATCGA TGCCAATGAT AACCAAATAT TGCTTAGTTG A
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| Protein sequence | MPPFNQPAPQ LGNQYSDDRL LQLYLRRRLP ADVLSQIKPA LQTIGDLAGN ELYQLQLADR
LNEPQLTQWD AWGERIDQIV LTPLWQRAEQ IAASYGLIAT AYEQTFHEYS RTCQFALAYL
FHPSSDVYSC PLAMTDGAAR TLLQAGNQAL IERAIPHLIS RDPDQFWTSG QWMTESTGGS
DVGLSETIAR QAEDGTWRLY GRKWFSSATT SQMALTLARP EGNPAGGRGL ALFYVETRDQ
RGRLTQIEVN RLKDKLGTRK VPTAELNLLG TPAIPVQGLR DGVRAIVPML QITRTWNSVS
AVGFMRRGMA LAQDYAQKRW AFGSLLNQKP LHVDTLAGLQ AEYAGAFLLT FYLIELLGLD
ETGRSTPQQR QLLRLLTSIA KLTTARQAVN HTSEIIESFG GAGYVEDTGL PSLLRDAQVL
SIWEGTTNVL ALDSLRALSE DPGIWPVLRE QVNLWLSNAH DPSLSQAIVV VQTALDRCEQ
WLAESSNDRS VAEMGARRWA LTLGRALELA LLIEHAQAAL IAPNDRWLAA AARRFSCSAV
NLIATIDAND NQILLS
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