| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3390 |
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| Symbol | |
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| ID | 5735251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 4273123 |
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| End bp | 4275171 |
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| Gene Length | 2049 bp |
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| Protein Length | 682 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641280537 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001546154 |
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| Protein GI | 159899907 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.320004 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGTTAC GACCTAAAAT TCGCTTACCA ACGCTGCTAA TCGGCGTAAA TTTGGCAGTT
TTAATCATTG CCATCGTAGG TATTGCTACG GTGGCGATTG GTTTGTTATT GGAACTGGGC
GATGATCAAG GCTTAGCGCG AGTCCGCCAA GGGGTAGCGA TCGCCCAAAA CGATGTGCAA
CGCTCTGGCA ACGAGGTATT AACCACCGCC CAACTGTTGG CCGAACGCCC AACCCTCGCT
CGCTTGCTGC AAACCAATGA TCAGGTTGCC CTTGAAGATT TTTTGGGCCA ATTTCAGGCC
ACCAGCGAAC TGGCTGGCTG TGCAATTTAT CAAGATGGTC AATTATTGAT TGCGGTTGGT
ACTGAAATTC CAGCCATGCC TGCGCTCGAT AATCGCGCAT TATTGCTTGA TGGAGCGTTG
TTGGGTTTAG CGGCCCGCGT GCCACTTGCC ACTGATCCCA GTGTGATCGT TGCAGTTTGG
ATTGAGCTTG ATCAGCAGTA TCAGGCTGAA TTATCGACTA TTTTGAGTTT ACCCGTAGCG
ATTGTGCCCC AACAACGCCT GACTAACCCC AATGATCCCT TGACTGAAAC CCAAGCCGCT
GCCTTGACGA CCAACACCAT TACCGATAGC TACTTGCGCG ATCAACATCA CTATATCGCT
AGCGCCCCAT TATTGGCCAG CACCGGTCAG CCAATTGGTG TGGTCAGTGT GACCTTACCT
GATACTCAAA TTCGTAATTC GGCGCAGCGG CTTAGCGAAG TTCTGCTGAC CATTGCTTTA
GTTGGCGGAG TTTTGGCGTT TGGCTTAAAT TTGTTGGTTG GGCGCTATGT TGGTTGGCCG
TTGCGGCGTT TGACCATGGC CGCCGCCCAA ATTGGCCGGG GCGACTTAAC CACGCCAGTT
GCTCCAGCCA AAGGCGTTGA AGTGGGCATG TTGGCGGGCA CATTGGAGGA TATGCGCCAG
CGTTTGCGTG GCCTGACCGC CGATTTACAA CGCCAGCAAG CCGAGGCCAA CGCGATTTTG
GCTGGCATCG TCGAAGGCGT GTTCACCGTT GATCGTGATC GGCGGATTCG CTATTTGAAT
CAACAAGCCG CCAGCATGCT TGGTATCGCG CCAGAGCAGG CAATTGGCCG CTTTTGTGGC
GATGTATTAC AACCGCAATT GGTCGATGGC GTGCGTCCCT GTGAGCAGGC TTGTCCAATT
ATTCATGCAC GATTTCGCGG CCAAGCTCAA GCAACCGAAC ATTTGCAATT GCTTGATGGC
CGCCGCCGCA CAGTGATTAT TACCAGCGCT GGCGATGTTG AGCAAAACCA TGTGCAAGTA
ATGCGCGATG AAACTGATAT TGAAACCTCA CGGCGCTTGC GTGATACGAT TCTCGCCACG
ATCTCGCACG AATTTCGCAC CCCGTTATCA GCCCAATTAG CCTCGTTGGA ATTGCTGCTT
GATCAATTAC CGCAACTTTC GACTGCTCAG ATTCGCCAAT TAATCGTATC ATTACAGCGT
GGAGCCTTGC GATTAACCTA TTTGATCGAT AATTTACTGG AAAGTGCGCG GATTGAAGCA
GGCCAATTGA CGATTCGACG CAGCGAAATT GCGCTTGATG GTGTGGTTGA GGCTGCCGTC
GAATTGATGT TGCCCTTGAT CGAACAGCGC CGCCAGCAGG TCGAGGTCGA TTTGCCTTAT
CCGCTGCCGA ATGTTGCTGG CGATGCCACC CGCCTAACCC AAGTCTTTGT TAATTTGCTA
GCCAATGCCA GTAAATTCTC GCCACCAGAT ACCACAATTG CGATTGGCGG CGAAGTAACC
AGCGAACATC TGCTAGTATG GGTCGAGGAT GAAGGGCCAG GCATGCCGCC ATCGCCCAGC
GAATCGCCGT TTCGCTTGTT TGTGCGCGGG CGCAACGAGC CAGAGCAAAG CGGCGCAGGC
TTGGGCTTGT GGATTGTTCA ATCAATTATT GAGCGTCACA ATGGCCGAAT TCATGTGCCA
GCCCGCAGCC TTGGCACGCG GATTGTGATT GAATTACCCA GAGGAACTGA TGAAGATTTT
AGTCGTTGA
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| Protein sequence | MQLRPKIRLP TLLIGVNLAV LIIAIVGIAT VAIGLLLELG DDQGLARVRQ GVAIAQNDVQ
RSGNEVLTTA QLLAERPTLA RLLQTNDQVA LEDFLGQFQA TSELAGCAIY QDGQLLIAVG
TEIPAMPALD NRALLLDGAL LGLAARVPLA TDPSVIVAVW IELDQQYQAE LSTILSLPVA
IVPQQRLTNP NDPLTETQAA ALTTNTITDS YLRDQHHYIA SAPLLASTGQ PIGVVSVTLP
DTQIRNSAQR LSEVLLTIAL VGGVLAFGLN LLVGRYVGWP LRRLTMAAAQ IGRGDLTTPV
APAKGVEVGM LAGTLEDMRQ RLRGLTADLQ RQQAEANAIL AGIVEGVFTV DRDRRIRYLN
QQAASMLGIA PEQAIGRFCG DVLQPQLVDG VRPCEQACPI IHARFRGQAQ ATEHLQLLDG
RRRTVIITSA GDVEQNHVQV MRDETDIETS RRLRDTILAT ISHEFRTPLS AQLASLELLL
DQLPQLSTAQ IRQLIVSLQR GALRLTYLID NLLESARIEA GQLTIRRSEI ALDGVVEAAV
ELMLPLIEQR RQQVEVDLPY PLPNVAGDAT RLTQVFVNLL ANASKFSPPD TTIAIGGEVT
SEHLLVWVED EGPGMPPSPS ESPFRLFVRG RNEPEQSGAG LGLWIVQSII ERHNGRIHVP
ARSLGTRIVI ELPRGTDEDF SR
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