Gene Haur_3387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3387 
Symbol 
ID5735248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp4270013 
End bp4270984 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content49% 
IMG OID641280534 
ProductABC transporter related 
Protein accessionYP_001546151 
Protein GI159899904 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGCCT TATTGCTTGA GAAAATCGTC AAACGTTTTG ATACAACAAC CATTTTGCGT 
CAACTCAATT TGCTGGTGCA AGAAGGTCAG GTTTATGGGT TGCTGGGAGC CAATGGCGCG
GGCAAATCAA CCTTAATTCA CTTAATTATG GGTTTTTTAT ACCCCGATAG TGGTCGAATT
GAGGTTTTTG GCAAAACACC TAGCGCTATG CATGGTCAAA TTGGCTATTT GCCCGAACGC
CTACGCTACC ACACCCATTG TAGCGCCCGC GAATACCTGA CCTATATGGG CAATTTTGCT
GGCATGCGCG GAGCCAGCCT GACCAGCCGA ATCAACGATT TGCTCGAATT GGTTGGCCTA
ACTGAATCTG CCGATAAACG CATGCGCAAT TATTCCAAGG GTATGACTCA GCGCGTCGGA
ATCGCCCAAG CCTTGCTTAG CGATCCGCAA CTATTGCTGA TCGACGAGCC ATCATCAGGC
CTCGACCCCC AAGGCCAACT TGAAATGCGC GATCTTTTGC TCGATTTACG CAGCCAAGGC
CATACCATTT TGATCTGCTC ACACCAGCTT GATGAGATTG AGGCGGTTTG TAATCGGGTG
GGCATTTTGG TGCATGGCGC AATCGCCGCT GAAACCGATT TAGCCCAACT TACTGGCACA
AATGGCGTGG TGATTACGCT TAAAGAAACC CCAACCGATG CGCTCGATTT TGCCTTGCGT
TCAATCGACC CAAGCATTGT ACGGGATGAT CGCTTTATCA CAGTGCCCGA AAACAGCCCA
AGTTTGCAAG GGCGTTTATT ACAATTATTG CTTGACGAAG GCTATACCGT GGCTTCGCTA
CAACCAAGCC TTGGCAATTT GCGCGATCTC TATTTGCACG TTGTATCGGG TAAAGAACCA
CCAGCTGAAA TGCAGCCCCA AGCGCCGCTG GCCATTCTGG ATAGTTTGTT AGCTGGCGAG
GAGCAGCAAT AA
 
Protein sequence
MTALLLEKIV KRFDTTTILR QLNLLVQEGQ VYGLLGANGA GKSTLIHLIM GFLYPDSGRI 
EVFGKTPSAM HGQIGYLPER LRYHTHCSAR EYLTYMGNFA GMRGASLTSR INDLLELVGL
TESADKRMRN YSKGMTQRVG IAQALLSDPQ LLLIDEPSSG LDPQGQLEMR DLLLDLRSQG
HTILICSHQL DEIEAVCNRV GILVHGAIAA ETDLAQLTGT NGVVITLKET PTDALDFALR
SIDPSIVRDD RFITVPENSP SLQGRLLQLL LDEGYTVASL QPSLGNLRDL YLHVVSGKEP
PAEMQPQAPL AILDSLLAGE EQQ