Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_3322 |
Symbol | |
ID | 5735192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 4189630 |
End bp | 4190697 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641280469 |
Product | glycosyl transferase family protein |
Protein accession | YP_001546086 |
Protein GI | 159899839 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.120445 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGGGCAC TTAGGCCATG CTTAATTTTC ATCAAGAGAA TCCATATGAG TGTTTCGCTA GCCCAAATTT TTCTCATCTT TCTTTCGGCG CTCACCATGT CGATTGTCAG CACGCCCTTA GTTCGCCGCT TGGCGATCGC GGTTGGAATT ATTGATCAAC CTAATGCCCG CAAAGTGCAT ACCAACCCTG TGCCGTTGCT AGGTGGCTTG GCAATTTATG GCGGGGTCGT GGTTACGTTG CTCATTTGGG ATGACCAATT TATTCTGCGT GAATTGGCGG CGATCTTGGG CGGCGCGACG ATTGTGGTTG TCTGTGGCAT GCTCGATGAT AAATGGGGCT TATCGGCCTC ATTGAAGTTG CTGGGCCAAA TTATTGCCTG TTTTGTGCTG ATTTATGCTG GCATTCAGGT GCAATTATTT GCCTCGCCAT GGCTCAACGC CCTGATCACA ATTGCTTGGG TCGCGGGTAT CTCGAATGCG ATTAATTTTT TGGATAACAT GGATGGCTTG TCGGCAGGCT TGACCGCCGT TGCTTCGGCG TTCTTCTTGC AACTAGCCGT TTTGAATGGC CAGTTTTTGG TCGCAGCTCT ATCGGCGGCA ACCATGGGCG CGTGTATCGG CTTTTTACGC CATAACTTTG TGCCAACCAA AATCTTTATG GGCGATACGG GCAGCCTGTT TTTGGGCTTT ATTTTGGCAG TGCTCGGCAT CAAACTGCGC TTTCCGAGCA ACAGCATCAT CGTTACTTGG ATGATTCCGA TTGTGGTGCT GGGCGTGCCA ATTTTCGATA CCTCGATGGT GATTGTGGCT CGTTTGCGGC GGCGGGTCAA TCCCTTCAAT ACCCCTGGCA AAGACCACAT TTCACATCGC TTTGTGGCGC TGGGGTCGTC GCGGCGCGAA GCTGTATTGA TTTGCTATAT GCTGGGCGTT GGCTGTGGCA TTACCGCGAC CATGTTGAGC AAAGCCGATG TCCAAGAAGC CTATGCCTTG GCGGCCTTGT TGATTGGGAT TGCGTTGGTG GGAATTTGGC TGTTTGAACG CTATGCGCGG TATAACCCGC CGAAGTGA
|
Protein sequence | MRALRPCLIF IKRIHMSVSL AQIFLIFLSA LTMSIVSTPL VRRLAIAVGI IDQPNARKVH TNPVPLLGGL AIYGGVVVTL LIWDDQFILR ELAAILGGAT IVVVCGMLDD KWGLSASLKL LGQIIACFVL IYAGIQVQLF ASPWLNALIT IAWVAGISNA INFLDNMDGL SAGLTAVASA FFLQLAVLNG QFLVAALSAA TMGACIGFLR HNFVPTKIFM GDTGSLFLGF ILAVLGIKLR FPSNSIIVTW MIPIVVLGVP IFDTSMVIVA RLRRRVNPFN TPGKDHISHR FVALGSSRRE AVLICYMLGV GCGITATMLS KADVQEAYAL AALLIGIALV GIWLFERYAR YNPPK
|
| |