Gene Haur_3321 details

Gene Information

• Locus tag: Haur_3321
• ID: 5735191
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Herpetosiphon aurantiacus ATCC 23779
• Kingdom: Bacteria
• Replicon accession: NC_009972
• Strand: +
• Start bp: 4186112
• End bp: 4189537
• Gene Length: 3426 bp
• Protein Length: 1141 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 641280468
• Product: TPR repeat-containing protein
• Protein accession: YP_001546085
• Protein GI: 159899838

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTTTGA AGGAGTCTGC CTTGGATTCA CGCGAGACAA CGATCAGCCT ATGGTCGCGG 
CGGGTGATGG AAGCCTGCTG GCTATTGGCT TTAGCAATGA TCCCGGTCTA TTTTAGTTTG 
CTCAGTGACC GCCACTTTGA GCCAGATAAA GCGGTAGCCT TGCGCTCAAT CGTGATGATC 
CTTGGCGGTG CGTGGATTAT CAATTGGCTC GAACGTGGCC AAGTTTTTCG TTCATGGCCG 
CGTTGGCGCG ATTGGTGGCG CTCGCCGTTG GTTGCTCCGG CTATCGTTTA TGTTGGGGTC 
TTTTTCTTTA CCACGCTCAC CTCGGTGTTG GTGTTTACCA GCTTTTTTGG CGGCTATAAT 
CGGCTTCAAG GCTTTTACAC CAATTTCTCG TATGTCGTGG TGTTTGGGGC GATGCTGGCG 
CATGTGCGTC GCCGCGAGCA ACTTGAGCGG ATTATTACGG TGATTATTGC CACAACCTTG 
CCAACCTTGG GCTATGGTTG GGTGCAATAT CAGCGCAGCG ACCCCTTGCC GTGGGCTGGC 
GATACTGCGG CACGGGTTGC CTCAAGCATG GGCAACTCGA TTTTTGTGGC AGCCTATTTG 
ATTTTAACCC TGCCCTTTAT GTTCTATCGC TTGATTACCA GCGTGATGGC TACCAAACGT 
GCTGAGAGCG AAGCTACAAA CTCGGTTGGC TTAGATGCAG CGTGGTTTGT TACCTTGGGC 
TTGATTCCGC TTGGTCAATT AAGCCTCTTG TATGCCACCC TCAAGTTGGG AGCATTGCTG 
CAAGCGCCCT TGTTGGGCAT CGGCCATTGG TGGATTTTCC CAATGTCGGT GATTGTAGTA 
GGCAGTACCT TGCCCTTAAT TTCGTGGGTA ACCAGCACCC GCAGTCGCAG CGATTGGCGC 
TTATATCTGC CCGGCGGCTT GATTTTGCTG TATATGCTGA GTTTAGTGTT GGGTGGGTAT 
TTAACTGCCG ACCAATGCCA AGGCACAATT AGCGAAACCT GCTACAACCT TGATATGGCA 
ACTGCTAAGC GTGCTAGCGA CTTTCGTACC TGGTTCTTGT TGGCGATGGC GGCCTATTTT 
GGTTTTTATG GCTTAGTGCT AGCCTTGCCG CGCCGCAGCG AAGCAGCAGC CCATGCAATT 
GTGCAATGGC TCAGTGCTGC AATCTATGCT GGGTTAAGCC TGTTCACGAT TGTCATTATC 
TTCTTTACCC AAAGCCGTGG CCCACAAATC GGCATGTTCG TAAGCATTTT CGTCTTCTTC 
ACCCTCTTTT TGTTGCAAGG CCTACGCAGC ACCAGCTTCA AACGCATTTT TGGCGCGGCG 
CTGAGTGCAT GGGTTGTGCT GGCCTTAGCA GGAGCCGCCT TCTTGGTGGT GCTTAATACA 
GACTCAAGCA GTTTTAGTGG GCTACGCCAA AGCAACCGCT ATATCAGCCG TTTGGGCAAC 
TTGCTTGAAA CTGATGGCGG CACTGGTTTG GTACGGGTGT TGATTTGGCG TGGCGATGAG 
CATACCCAAG GCGCAGTTGG TTTGGCCTTG AGCGATCCGT TACGCACAGT AATTGGTTGG 
GGGCCAGAAT CGATGTTTGT GGCCTACAAC CCATTTTATC CACCACGGTT GGCCAATTAT 
GAATCGCGCG GGGCTTCGCC CGACCGTTCG CACCAAGCCT TGTTGGATGA ATTGGTGACC 
AAAGGCGCGA TTGGCTTGTT TAGCCATTTA TTCTTATTTG GCTCATTCTT AATTATTATG 
CTGCGGCTAC TGTGCATTCC ACGACTGATC AATTTAGGCC TAACCAGCCT TTTGATGCTT 
GGAATTGGCA TCTTCTTTGC CGTCTTTTTG AAGAGCCTCG CACTTGGTTT GATCGCTGGT 
AGTGTGGGTT TGTTGGTGGT TGGCCTCGCC ACGTGGTTGG GCTATGCCAA GCCGCTCGAA 
GCATCGCTGA GCTTTACCTG GCAATTGTTG ATTATCACGG TGCTTTCGGC GGTTGCCGCC 
AATTTTGTCG AAAACCTGTT TGGGATTCCA ATTGTTTCGT CGTTACTCTA TACCTGGGTG 
ATTATGGCGG TTGGCATACT TGCCGGGGCA CACGCTGGAG CCTATCAACT TGGCACAAAG 
CCAGTGGTTG TGGCAGCACC AGTTGTCGAA GAAGCCGCCG AATCAACCCC AGCCAAAGCT 
GGCACCAAAC GCCAAGCAGC CCAAAATGCT CGTCGCACCC CTGCTGGCCG TGGTCGTACC 
AGCAGCGGCG TAACTGGCGC TGCACCTGCT CGCATTTTGT ATGCAGTCGT TGTGCCAATT 
GTCTTGCTGT TGGTCTGGTT CCTCAACCTC GATAATATTT TTGCTGATAT GCGCTATTTG 
CAGGGCAAAC AATTTATCGA CCAAGGCCAA GGCCTTGATC AACATCTTTT GGGCTTTGCC 
GCGATTCAGG ATGCAGTTGA GCATGCACCC AACGAAGATT TATATTTCTT GATGTATGGT 
CGGGCCTTGA TGACCTTGGC AACTGATTTG AGCATTGAAC AAAACAAATT GGTTAGCGAA 
AATCAAAATG CGGCGATTGC CCAAGTACTG AATAGTCGCC CACGGCCTGA TGCTGAACTC 
GCCGATTTGC CCGATGCTGA ATATAGCGTG GCTGGTTTGC AAACCGTTGC CCGCGATTTC 
TTGACCAAGT TTGGGCCATT GCAAGTGCTC GATTATGCCC GCTTGGCCTT GGAAGAAGCC 
CAGCGGCTCA ATCCCCAGAA CAAAGATCAT CCGGCTAACT TAGGCCGTTT GCATTCATCA 
TGGTTCCGTA ACACCGAGCA AAGCGACCCT GAAGGCGCAC GGATGCACCT TGATGCCGCG 
ATTGAGGCCT ACAAACAAGC GCACACGGTC GCGCCCCAAG ATGTTGAGTT GACTGGTCAA 
TGGGCTATGT TGTATTTGTA TCGCCAAGAA TACGATACAG CGATTGCCGA ATTGACCAAA 
GCGACTACGC TTGATCCATT ATGGTCGCTC AATTTCATTC GCTTGGGCGA GGCCTACCGC 
CGCAAGGGCG ATTTGCCCAA CGCAGCTTTA GCCTTTGCCA ATGCCTTGGC GCTTGATCCA 
CGGGCGCTCA GCAGCAGTGG CTTGGTTGAC GTAGCCGAAT TGCCAGCCGA ACGCACAGCC 
CGTGTCCAAG CAACCTTTGC CTCGATGCAA AGCGATCCTG CGGTGTTTGA TAGCTTCTTG 
ACAGGCTTTG AGCGAGCGAT TGCCAGCAAG CCAGGCGATA TGTCGTATCG CCAGATTTAC 
ACCCAAGTGT TGAGCGATAG CCAACGCTAT GATGCAGGCT TGACCCAAGT CCAACTAGCT 
TTGGCCGAAA TGGACAAAAT GGGTGCAGCT GATCCGACAT TCAACACCAC CTATGCTGAT 
ACCCGAACGG CCTTTGAAAA GCTAGTTAGC TTTTTTCAAA GCCAACTCGG CCAAAGTAAA 
CCATAA 

 

Protein sequence

MPLKESALDS RETTISLWSR RVMEACWLLA LAMIPVYFSL LSDRHFEPDK AVALRSIVMI 
LGGAWIINWL ERGQVFRSWP RWRDWWRSPL VAPAIVYVGV FFFTTLTSVL VFTSFFGGYN 
RLQGFYTNFS YVVVFGAMLA HVRRREQLER IITVIIATTL PTLGYGWVQY QRSDPLPWAG 
DTAARVASSM GNSIFVAAYL ILTLPFMFYR LITSVMATKR AESEATNSVG LDAAWFVTLG 
LIPLGQLSLL YATLKLGALL QAPLLGIGHW WIFPMSVIVV GSTLPLISWV TSTRSRSDWR 
LYLPGGLILL YMLSLVLGGY LTADQCQGTI SETCYNLDMA TAKRASDFRT WFLLAMAAYF 
GFYGLVLALP RRSEAAAHAI VQWLSAAIYA GLSLFTIVII FFTQSRGPQI GMFVSIFVFF 
TLFLLQGLRS TSFKRIFGAA LSAWVVLALA GAAFLVVLNT DSSSFSGLRQ SNRYISRLGN 
LLETDGGTGL VRVLIWRGDE HTQGAVGLAL SDPLRTVIGW GPESMFVAYN PFYPPRLANY 
ESRGASPDRS HQALLDELVT KGAIGLFSHL FLFGSFLIIM LRLLCIPRLI NLGLTSLLML 
GIGIFFAVFL KSLALGLIAG SVGLLVVGLA TWLGYAKPLE ASLSFTWQLL IITVLSAVAA 
NFVENLFGIP IVSSLLYTWV IMAVGILAGA HAGAYQLGTK PVVVAAPVVE EAAESTPAKA 
GTKRQAAQNA RRTPAGRGRT SSGVTGAAPA RILYAVVVPI VLLLVWFLNL DNIFADMRYL 
QGKQFIDQGQ GLDQHLLGFA AIQDAVEHAP NEDLYFLMYG RALMTLATDL SIEQNKLVSE 
NQNAAIAQVL NSRPRPDAEL ADLPDAEYSV AGLQTVARDF LTKFGPLQVL DYARLALEEA 
QRLNPQNKDH PANLGRLHSS WFRNTEQSDP EGARMHLDAA IEAYKQAHTV APQDVELTGQ 
WAMLYLYRQE YDTAIAELTK ATTLDPLWSL NFIRLGEAYR RKGDLPNAAL AFANALALDP 
RALSSSGLVD VAELPAERTA RVQATFASMQ SDPAVFDSFL TGFERAIASK PGDMSYRQIY 
TQVLSDSQRY DAGLTQVQLA LAEMDKMGAA DPTFNTTYAD TRTAFEKLVS FFQSQLGQSK 
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