| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3265 |
|---|
| Symbol | |
|---|
| ID | 5735133 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 4126663 |
|---|
| End bp | 4128414 |
|---|
| Gene Length | 1752 bp |
|---|
| Protein Length | 583 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641280411 |
|---|
| Product | peptidase S8/S53 subtilisin kexin sedolisin |
|---|
| Protein accession | YP_001546030 |
|---|
| Protein GI | 159899783 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1404] Subtilisin-like serine proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.536074 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAGCGTC TGTTTGTTTC ATTCGTCTTG ATCTGCAGTC TTGTCATTAT CTTCAGTGCT
CCCAACCCAT CATTTGGTCA AAGCCGAACT CCTGCGAAAC CAGTTGATCG CGTTGATTTT
GCTGCTCCAG CAGTAGCGGG CCAATTTGTG GTCAAATTCA AAGCCACAAC CAGCAAAGCC
AACCGCAGCT CGGCCCTCAA AGCCCTCGGC GCGGTACAAA TCGATCGCAT TGCAGCGCTT
GATGCAGAAG TGATCGAAGT TGCGAGCCTC AAGAGCAACG ATACCCTCGC AGGTCGCGAA
GCTGTCTTGG CTGGCTTGAA GCAAAATCCC AATGTCGAAT ATGCCGAACC CAACTTTATT
TATAATGTGA ATTTTACGCC CAATGACCCA AGCCAAAGCT CACAATGGGC ATGGGGTGTC
ATCCGTGCAT ATACCGGTTG GGATATAACC CAAGGCAGCA GCAGCGTGGT GATTGCAGTT
GTTGATACAG GGGTTCAAGG CACCCACCCT GATCTTGATG CCAAGATGGT GGCTGGCTAC
GACTATATCG ACAACGACTC AACGCCAACC GACGGCAATG GCCACGGTAC CCACGTTGCA
GGTACAAGCG CCGCTGAAAC GAATAACAGC ACTGGTGGTG CTGGCACATG TCCAAATTGT
AAGGTGATGC CAGTGCGGGT ATTGGGCAAC GATGGTAGTG GGACGTTGGC TGGTGTGGCC
AATGGGATCA CCTACGCTGC CGACAATGGC GCAAAAGTCA TCAATTTGAG CCTTGGTGGT
GGTGGTTCGA CCGCATTGCA AAATGCTGTT GACTACGCTT GGGGCCGTGG GGTGTTCTTG
GCTTGTGCTG CTGGTAATAG CAACACCTCA AGCACCACCA GCTCGTATCC AGCTGCTTAC
ACCAACTGTT TTGCGATCGC CTCAACCACC TCAAGCGATG CTCGTTCATC GTTCTCGAAC
TACGGTTCGT GGGTTGAAGT GGCTGCCCCA GGTTCGAGCA TCTACTCAAC TTGGATCAAC
AGTGGCTACA ACACGATCAA TGGTACTTCA ATGGCTACCC CACACGTTGC TGGTTTGGCT
GGCTTGTTGG CCTCACAAGG CTTGACCAAT AGCCAAATTC GCGACCGCAT CTGCTCGACC
TCAGATCGCA TCACGGGCAC AGGCAGCACT TGGACTTGTG GTCGGATCAA CGTCTACAAT
GCTGTCAACA ACGGTGGCTC AACCCCAACC CCAACGCCTC CAACCAGCAC GCCAAATCCA
ACCACCCCAA CCGTGGTTCC ACCAACCGCA ACCCCACCTC CAGGCGGCGG TAGCATTGTC
AATGGTGGCT TCGAAAGTGG CACAACTGGC TGGACCCAAG CCTCAAGCGG TGGTTATAAC
GTAATTGATA CCACTCGCCC ACGCACTGGT AGCTACAGCG TTTACATGGG TGGCTACAAC
AATGCCAGCG AAGGGATCTA CCAAACGTTG ACCGTGCCAG CAGGCAAGTC ATTGAGCTTC
TACTGGTATC AAACCACTGC CGAAGGCAGC ACGACAGCTT ACGACTACCT GCGCGTTCGG
GTCTACAACA CCAGCGGAAC CTTATTGGGA ACCTTGGCTA CTCGCTCGAA TGTCAACACC
AAGAACGCTT GGGTGGCTGA AAGCTTGAGC TTGGCAGCCT ATGCTGGTCA AACGGTTCGT
ATCCGCTTTG AAACCACAAC AGATAGCTCA TTGATCACAT CGTTCTTTGT TGACGATGTA
AGCCTTCAAT AA
|
|---|
| Protein sequence | MKRLFVSFVL ICSLVIIFSA PNPSFGQSRT PAKPVDRVDF AAPAVAGQFV VKFKATTSKA
NRSSALKALG AVQIDRIAAL DAEVIEVASL KSNDTLAGRE AVLAGLKQNP NVEYAEPNFI
YNVNFTPNDP SQSSQWAWGV IRAYTGWDIT QGSSSVVIAV VDTGVQGTHP DLDAKMVAGY
DYIDNDSTPT DGNGHGTHVA GTSAAETNNS TGGAGTCPNC KVMPVRVLGN DGSGTLAGVA
NGITYAADNG AKVINLSLGG GGSTALQNAV DYAWGRGVFL ACAAGNSNTS STTSSYPAAY
TNCFAIASTT SSDARSSFSN YGSWVEVAAP GSSIYSTWIN SGYNTINGTS MATPHVAGLA
GLLASQGLTN SQIRDRICST SDRITGTGST WTCGRINVYN AVNNGGSTPT PTPPTSTPNP
TTPTVVPPTA TPPPGGGSIV NGGFESGTTG WTQASSGGYN VIDTTRPRTG SYSVYMGGYN
NASEGIYQTL TVPAGKSLSF YWYQTTAEGS TTAYDYLRVR VYNTSGTLLG TLATRSNVNT
KNAWVAESLS LAAYAGQTVR IRFETTTDSS LITSFFVDDV SLQ
|
|---|
| |