Gene Haur_3263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3263 
Symbol 
ID5735131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp4125109 
End bp4126161 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content55% 
IMG OID641280409 
Productnicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase subtype 
Protein accessionYP_001546028 
Protein GI159899781 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2038] NaMN:DMB phosphoribosyltransferase 
TIGRFAM ID[TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.0843845 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACATTG ACGATCTATC AGCCACGATT GCCGAGCTTG ATTCCGCTGC AATTCAGCAA 
GCGCAACAAC GCCAAGATCA ACTGACCAAG CCGCAGGGAG CGCTGGGCCT GCTCGAAACC 
TTGTCAATTC AATTAGCAGG TATCACTCAG CAATGCCCGC CAAGCGTGCA AAAACCGATC 
ATTGTCGTTG CGGCAGCCGA TCATGGGGTG GCTGAATATG GAGTGAGCGC CTATCCCTCA 
AGCGTCACGG CCCAAATGGT GGCGAATTTT TTGGCGGGCG GCGCGGCGGT GAGCGTTTTG 
GCCCGCCATG TTGGAGCTGA ACTCTTAATC ATTGATGCGG GGGTACAAAC CGCAATTGTT 
AGCGAGGCCG CTAATTTTCG CAGCGAATGG CTGGGGGCTG GCACGCACAA CTTGGCAATT 
GAACCAGCAA TGAGCCAAGC CCAAGCTCAA TCAGCATTTG AACGCGGCAT ACGCATCGCT 
CATGAATTGG CTGATGCAGG CCACGATTTG ATTGCGCTTG GCGAGATGGG GATTGGCAAT 
ACGACCGCTG CCGCCTGTTT AACCGCGATC TATTGCCAGC AACCTGCGGC TGCCGTTACT 
GGCCATGGCA CGGGCGTACA AGCCGAGCAC TATCAACGCA AAATCGAGGT TGTGGCTCAA 
GCAGTGGCAC GGGTTGGCAG TAATGTGGAT GGACTTCAGC CATTAATCGA GGTTGGCGGC 
TTTGAAATTG GTATTTTGGC GGGCATTATT GTGGGTGCTG CTCAGCGGCG TGTGCCAATT 
TTAGTTGATG GTTTTATCAC CACAGCGGCG GCTTTGGTAG CCCAAGCGCT TGCGCCAAAG 
GCGATTGATT ATTGTATTGC AGCGCATTGT GGAGCTGAGC CAGGCCATCG GATTGCTTTG 
CAACAATTGG GTTTGCGGCC ATTGCTTGAG CTTGATTTAC GGCTTGGCGA AGGCAGCGGC 
GCGGCTTTGG CGATTCCGTT GGTGCAAGCG GCCTGTCGCA TTTTAAGCGA AATGGCCACT 
TTTGCTAGCG CCCACGTTGA TACGGCGCTC TAA
 
Protein sequence
MNIDDLSATI AELDSAAIQQ AQQRQDQLTK PQGALGLLET LSIQLAGITQ QCPPSVQKPI 
IVVAAADHGV AEYGVSAYPS SVTAQMVANF LAGGAAVSVL ARHVGAELLI IDAGVQTAIV 
SEAANFRSEW LGAGTHNLAI EPAMSQAQAQ SAFERGIRIA HELADAGHDL IALGEMGIGN 
TTAAACLTAI YCQQPAAAVT GHGTGVQAEH YQRKIEVVAQ AVARVGSNVD GLQPLIEVGG 
FEIGILAGII VGAAQRRVPI LVDGFITTAA ALVAQALAPK AIDYCIAAHC GAEPGHRIAL 
QQLGLRPLLE LDLRLGEGSG AALAIPLVQA ACRILSEMAT FASAHVDTAL