Gene Haur_3200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3200 
Symbol 
ID5735068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp4048328 
End bp4049026 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content47% 
IMG OID641280346 
ProductTetR family transcriptional regulator 
Protein accessionYP_001545965 
Protein GI159899718 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCGGA CTCGTAATCA AGCACTCAAC GATGAAACGA TCATTCAAAT TAAGCAAGCG 
GCCCGCCAAC TGATGGCGCA ACATGGCACA GCTGGCTTAT CAATTCGTGG GATTGCCAAA 
GTTCTATCGG TTAGCCCACC AGCCCTGTAC CACTATTTTG CTAATTTGGA AGACCTGATT 
ACAACCTTGA TTGCCGATAG TTTTAATAGT TTGGCCGATA CCTTGGATGC TGTTGGGCTT 
AAATCGCGTA CAAAAACCAA GGCTGGGCGT TTGTTGACGG TATTTGAGGC CTATCGCCAA 
TGGGCCTTCG ATCATCCAAT CGACTTTCAA TTGATCTATG GCAATCCAAT TCCTGGCTAT 
AACGCGCCGC GCGAAATTAC GGTGCCAGCG GTGGTTCGCA CCTTTATTAC GCCAGTACGC 
TTGGCCGATC TCGCGATCAA AGCTGGCGAA TCAAGCCTCA ACGATTTTCG TATTCCAGCA 
TTTTGTGCTG AGCATATGAA TGGCATGATT GCCGAACATG GCTATCCGGT GTCGTTAGAG 
TCGATGTACC TGATTATGAC CCTGTGGACA CAAATTCATG GCCTGATTAT GTTGGAATTG 
TATGGACATC TTAGCTCGAA TGTTGGCAAT GCCGACGCTT TCTATCGCCA TCGCGTCATA 
GAAATGCTGC ATACGTTTGG TTTTGACGAT CTAACTTAA
 
Protein sequence
MARTRNQALN DETIIQIKQA ARQLMAQHGT AGLSIRGIAK VLSVSPPALY HYFANLEDLI 
TTLIADSFNS LADTLDAVGL KSRTKTKAGR LLTVFEAYRQ WAFDHPIDFQ LIYGNPIPGY 
NAPREITVPA VVRTFITPVR LADLAIKAGE SSLNDFRIPA FCAEHMNGMI AEHGYPVSLE 
SMYLIMTLWT QIHGLIMLEL YGHLSSNVGN ADAFYRHRVI EMLHTFGFDD LT