| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3108 |
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| Symbol | cysS |
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| ID | 5734980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 3921346 |
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| End bp | 3922746 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641280252 |
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| Product | cysteinyl-tRNA synthetase |
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| Protein accession | YP_001545874 |
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| Protein GI | 159899627 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0215] Cysteinyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00435] cysteinyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00597205 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCATTAG CAATTTACAA CACGCTTACC CGCCAGACCG AGCCGTTTAC ACCGTTGGTT
GCTGACCATG TGTCGATGTA TGTCTGTGGG CCGACGGTGT ATTCTGATGC CCATATTGGT
CATGCCATGT CAGCGGTGGT GTTCGATGTG GTGCGGCGCT ATTTGGAATG GTCGGGCTAT
ACGGTGCGCC ATGTGATGAA TTTTACCGAT GTTGATGATA AAATTATTCG CCGCGCCAAC
GAGCAAGGCC GTGATCCCAT GGAATTGGCC GAGAGCTATA CCTTGGCCTT TCTTGATCAA
TTGGGCCAAT TGAATGTGCT GCCCGCTACG GCCTACCCCC GCGTTTCAAC CACGATTCCG
CAAATTATTC AATTTATCGA AGGCTTGATT GCCAAAGATG CGGCATACCA CGCCAGCAAT
GGCGATGTCT ATTTTCGGGT ACGAGCCGAC GAAGATTATG GCAAACTTTC GCGCCGCGCT
GTCGATGATA TGCGCTCTGG TGCGCGAATT GCTCCCGATG AAGCCAAAGA TGACCCGTTA
GATTTTGCGC TGTGGAAATC GGCCAAACCA GGCGAGCCAG CTTGGGAAAG CCCATGGGGT
CAAGGCCGAC CTGGTTGGCA TATCGAATGC TCGGCCATGA GTTTGCACGA ATTAGCTGAG
CAAATTGATA TTCATGGTGG TGGAAACGAC TTGATCTTCC CCCACCACGA AAATGAAATT
GCCCAAACCG AATCATTAAC TGGCAAAAAT TTCGCCCAAG TCTGGATGCA CAATGGCATG
CTGCAATTGG CTGGCGAGAA AATGAGCAAA TCGCTGGGCA ATTTGATCAC GATTGATCAA
TTTTTAAGCG AACACTCCGC CGATATTATG CGCTTGCTGG TGCTTTCTGG CTCGTATCGT
GCACCATTGG TTTATAATGA TGAGGTTTTG GCTGATACCC AACGCAAACT TGAGCGAATT
ATGTCGGCGT TGAAACCAGC CCATGGCACG GCAACCAACG GCCCAGTCGT TGAGACGCTA
AATGCAATTG TTGCCAAAGC CCCAGCCGAT TTCCGTGCCG CGATGGACAG CGATTTCAAT
AGTGCAGCAG CCTTGGCGGT CTTGTTTGAT TTGGTGCGTT CGATCAACGC TGCCCGTGAT
GCAGGCGTTG GTGGCGAGCC ATTCGCAGCA GGTCAAGCCC GTTTACGTGA ATTAGCTGCG
GTGCTCGGCT TACGCTTAGA AGCGCCCAGC GCCAGCAAAA CCGATGCTGC ACCTTTTATC
GAATTGTTGA TTGAGCTACG CGCCGAGTTG CGCAAAGCTA AACAATGGGC ACTCTCCGAT
TTAGTACGCA ACCGCCTGAG CGAGCTTGAT GTACAACTCG AAGATAGTCC CAACGGCACA
ACCTGGACGA CGAAAGGCTA A
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| Protein sequence | MALAIYNTLT RQTEPFTPLV ADHVSMYVCG PTVYSDAHIG HAMSAVVFDV VRRYLEWSGY
TVRHVMNFTD VDDKIIRRAN EQGRDPMELA ESYTLAFLDQ LGQLNVLPAT AYPRVSTTIP
QIIQFIEGLI AKDAAYHASN GDVYFRVRAD EDYGKLSRRA VDDMRSGARI APDEAKDDPL
DFALWKSAKP GEPAWESPWG QGRPGWHIEC SAMSLHELAE QIDIHGGGND LIFPHHENEI
AQTESLTGKN FAQVWMHNGM LQLAGEKMSK SLGNLITIDQ FLSEHSADIM RLLVLSGSYR
APLVYNDEVL ADTQRKLERI MSALKPAHGT ATNGPVVETL NAIVAKAPAD FRAAMDSDFN
SAAALAVLFD LVRSINAARD AGVGGEPFAA GQARLRELAA VLGLRLEAPS ASKTDAAPFI
ELLIELRAEL RKAKQWALSD LVRNRLSELD VQLEDSPNGT TWTTKG
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