Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_3102 |
Symbol | |
ID | 5734974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 3911222 |
End bp | 3914857 |
Gene Length | 3636 bp |
Protein Length | 1211 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641280246 |
Product | GAF sensor signal transduction histidine kinase |
Protein accession | YP_001545868 |
Protein GI | 159899621 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2203] FOG: GAF domain [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGTATGC AATCCCAAAA ACAGGCATTT GAAGATTCCT CAGCCCACTT TTTGCGCGAG TGGCTCCCAC GTTTGGCAAC CGCCACGAGC ATTAATGGCT TGCACACAAA TTTAAGCGCC GCCCTTCGCC AATTTCGCCA TAATCCCCAC TACCATTTGA TTTGGCTTGA TCTGGCCGAA ACTCAGCCCG AAATTCCTTT AGAATTAATG CTCTCCAGCA ACCAACAGGA GCAGCTTGAG CAAGGTGCAA TTTTAACCAT CACCACCGCT GATGCCACGC AATGGACGAT GCTGCCCCTG TTGCACATTA CTTTGCGCGG TTGGTTGGCC TTGCCTGAAG CAACCCAAAA TGATCAATTG CTCTTGCCCT TAGCGCTGCA AACTGCCGCC AGCATGTGTA CGATCACCAA CAATCAACAA TTGGTGGCCG AACTGCGCGA GCTGACCCAA TTTAATTTGA TCAGCCAACG CCTGAATAGT TCGCTCGAGC TTGGGCCGTT GATCGAGGCG GTGTATCGCG GCATCCAACA GATGTTTGGT CCGCAAAATC TGTTTGTCTC GTTGTATGAT CCTGAGTCGC AGCTGTTTCA AGTGGCAGCG CATTTTTACG CCGATGGCCG CAGCACGACC CCCAATTCGC AATGGACAGT TGCCCATGGC TTAACTGGGG TGATTATTCG GCGCAACGAG CCAATTATCA CCGATCGCTA TCTCGAAACT TGTGCCCAAT ATCATGTTAC GCCATTGTTT ATTGATGATG ATATTCCGCC GCTGTTTTGG GCAGGTGTGC CGCTACGCTT CGGCGAACGG GTGCTTGGCA CGTTAGTGAT CTACACGCTT GAGCCAGAGG TACGCTACAA CGCCGACACG TTACGCAAAT TGGAGATGTT GGCTCATCGT GCGGCTGATA ATTTTGAGCA GGCACGGCTC TACGAACGCA CCACACGCCA AGCTCGCCAA CTTGAATTAT TAAACGAACT TGGCCGCACC ATCACTTCAA CCCTCGATTT TGAGGCCGTG CCATCGTTGA TCATGGGGCG GGTGCAAGAG CTTTTAAATG TTGAAGAGGG TTCGTTGTTG TTGCTCGACG AAGCCACCAA CGAATTAGTC TTTCGTTATA GTCTGAGTCC AGTTGGCCAG CAACTTTTGG GCAATCGTAT CCCGTCTAAT GTGGGGATTG CTGGCTTGGT GTTACGTACA GGCGAATCAT TGATCGCCAA TCGTGCTGGC GATCATCCGG CGTTTTATAC GGGCATTGAT ATGTTGGTGG GCCATGAAAC CCGCGATCTG CTGTGTGTGC CGTTGCTTGG CGCTGGCGGA GTCAAAGGGG TGATCGAAAT TCTCAATCAT CGCAATGGCT TGCCATTTAC TGCCGCCGAC CGCGCCTTGC TCGAAGCAGT GGCCGATCAA GCAGTAATTG CGATTGAAAA CTCTAATCTC TACACCCAAA CCGACCAAGC CCTGACTCGC CGAATCAGCG AACTCGACCA GCGTAACAAG CAATTTCAAG AGATTGTGCA AATTGGCAAT GCGCTCAAAG CTGCTTCAAA CCTTGGGTCG GTCTTGCCAG CCTTAGCCGA GGCTGTGCAA AGTGCTACGG GCTTCAACCA AGTGACGATT AGCCTCGTTC AAACTACGCC AGGCCATAAA GCAATTATCA AACGGGTCGT CAGCGCAGGT ATCGATCGCC AAATTTTCGA GGCCCAAGCT AGCATTACGA TTGAGCCTGA GCGCGTCGAG GCTTTGCTCA AACCGCAATA TCGCCGGGGT GAATCGACCT ACTATATCGA TCATCGGCGC AATGGTGATG CGCGTTTATG GCCTGATCCC TCAAATGGAG TCGATGTGCC AGAGCTACGG ACTGGCATGT GGCATCCCAA CGATAGCTTG TTTGCGGTGT TACGCAGCAC CAGCGGCGAT CTTTTAGGTC TTTTGACGGT CTATGCACCA AAAAATGGCC TTCAGCCAAC CACTGATCAA ATTCAAATGC TGGAGATTTT CGCCACGCAA TTGGCAGTTG CGCTCGAAAA CAATCGGCTC TACGAACGCC AACGCCAAAC CGTCGAAGGC TTGACTGCCT TGAGTGCGCT TGGCATGGCG ATCAACAGCA CCTTCAGCAA TGCGCAATCA ATTTGGCAAT TTACAGTTGG CGGGATGGTC GATTGGACTG GCGCACTCGG CGCTGGGGTA TTACTCAGCG ATCCCAATGA TCCCACGACA TTGCAACCAA TTGTCGGCTT GGGAATTGAG CACACACCTG ACGAGGCGAT TATTCAATTT GCCCATAAAG TGCTGGAGCG TGATAAGCCC TTGTTGCTTG GCGATCGCAG CAAATTGCCG AGTGTCTTAC GCGATTTAGG TGGTCAAGCC TTGGTGATGT TACCGTTGCT AGCAACCCAC CAAACCTTGG GCGTGATCTA CTTGTGGTAT CCCGAAACCT TGCCCAACCG CGAAGCCCAA GATTTGCTCT CGCTGTTTGT GGGCCAAGCC GCTGTGGCGG TCGAAACTCG GCGTTTGGCC GAAGAAGTGA GCAATGGCCG CGATCGCTTA GCCTCGATTT TGGCTTCAAC CGAAGAAGGC ATTATTTTGC TGAGCGCCGA TTTGCGGGTG GTCGAGGTCA ATGCCGCCGC TCAAACCATG ATCGGCAGCA ACGAAGTCGC CGAATTGTTG GGAGAGCCAG TCGATTTGCT GCTTACCCAT TGGTGCGCCC AGTGGAATAA ATCTGAGGAA GCTTGGAGCG AACTAACGCT GGCGATCTAC AAAGTTAGTC GCGGGCGTTT GGCTGAGGCG CGGGGCCAGT TAGAATTGGG CGGTTTGCGC AGCCAATGGC TCGAATGGAC AACTCTGCCA GTTCAAAGCG CGGCGAACCA AAGCCCTCAC CCGATTATTA TTGTGCTACG CGATATTACC ACCGAGATCG AGGCCGAAAA TCTGCGCCAC GACCTGACCT ATATGATGAT TCATGATTTG CGTGGGCCAC TGAGTTCGGT GATGACCTCG TTGGATATGC TGGCCAAAAA GATGGTTGGC GACCTCAGCG AAGGCCAAGA TAAAATTGTC AAAATCGCTT TGCGCAGTAG TGCTCGTCTG CTCGATATGG TTAATTTGCT GATGGATATT AGCAAACTTG AAGCAGGCCA GATGCCAATC ACACCAATTA CGGTGGCGGT TGATGATGTG GTGCGTTCGG TGATGCAAAA TTATGAGCCA TTGCTCAACG AGCGCAAAGT CCATGTAGCG CTGAATATTG CTGAAAATAC CCCTAAAGCC TCGGTTGATA TCCAAACCCT AGAGCGGGTC GTGCAAAACT TGCTGGATAA CGCGATTAAG TTCAGCCCAG CCTTATCAAC AATCACGATT AGCGCCAACA AAGTTCAAGC CAATCAACTA CCAAGCGATC ACCCAACTGG TCAATGGATT TTGTTGGGCG TGCGTGATGC TGGGCCTGGC ATTCCAGCCC AATATCGCGA ACGGGTCTTT GAAAAGTTTG CCCAAGTCAA ACAAACTGGG ATCAAAGGCA CTGGGCTAGG CTTGACCTAC TGTCGCTTGG CGGTCGAAAC CCACGGCGGG CGCATTTGGG TTGCCAATGA CGATGGCCCT GGGGCGCTCT TCCTGCTGAC TATTCCGATA GCCTAA
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Protein sequence | MCMQSQKQAF EDSSAHFLRE WLPRLATATS INGLHTNLSA ALRQFRHNPH YHLIWLDLAE TQPEIPLELM LSSNQQEQLE QGAILTITTA DATQWTMLPL LHITLRGWLA LPEATQNDQL LLPLALQTAA SMCTITNNQQ LVAELRELTQ FNLISQRLNS SLELGPLIEA VYRGIQQMFG PQNLFVSLYD PESQLFQVAA HFYADGRSTT PNSQWTVAHG LTGVIIRRNE PIITDRYLET CAQYHVTPLF IDDDIPPLFW AGVPLRFGER VLGTLVIYTL EPEVRYNADT LRKLEMLAHR AADNFEQARL YERTTRQARQ LELLNELGRT ITSTLDFEAV PSLIMGRVQE LLNVEEGSLL LLDEATNELV FRYSLSPVGQ QLLGNRIPSN VGIAGLVLRT GESLIANRAG DHPAFYTGID MLVGHETRDL LCVPLLGAGG VKGVIEILNH RNGLPFTAAD RALLEAVADQ AVIAIENSNL YTQTDQALTR RISELDQRNK QFQEIVQIGN ALKAASNLGS VLPALAEAVQ SATGFNQVTI SLVQTTPGHK AIIKRVVSAG IDRQIFEAQA SITIEPERVE ALLKPQYRRG ESTYYIDHRR NGDARLWPDP SNGVDVPELR TGMWHPNDSL FAVLRSTSGD LLGLLTVYAP KNGLQPTTDQ IQMLEIFATQ LAVALENNRL YERQRQTVEG LTALSALGMA INSTFSNAQS IWQFTVGGMV DWTGALGAGV LLSDPNDPTT LQPIVGLGIE HTPDEAIIQF AHKVLERDKP LLLGDRSKLP SVLRDLGGQA LVMLPLLATH QTLGVIYLWY PETLPNREAQ DLLSLFVGQA AVAVETRRLA EEVSNGRDRL ASILASTEEG IILLSADLRV VEVNAAAQTM IGSNEVAELL GEPVDLLLTH WCAQWNKSEE AWSELTLAIY KVSRGRLAEA RGQLELGGLR SQWLEWTTLP VQSAANQSPH PIIIVLRDIT TEIEAENLRH DLTYMMIHDL RGPLSSVMTS LDMLAKKMVG DLSEGQDKIV KIALRSSARL LDMVNLLMDI SKLEAGQMPI TPITVAVDDV VRSVMQNYEP LLNERKVHVA LNIAENTPKA SVDIQTLERV VQNLLDNAIK FSPALSTITI SANKVQANQL PSDHPTGQWI LLGVRDAGPG IPAQYRERVF EKFAQVKQTG IKGTGLGLTY CRLAVETHGG RIWVANDDGP GALFLLTIPI A
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