| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_2996 |
|---|
| Symbol | |
|---|
| ID | 5734868 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 3783092 |
|---|
| End bp | 3785539 |
|---|
| Gene Length | 2448 bp |
|---|
| Protein Length | 815 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641280140 |
|---|
| Product | ATP-dependent protease La |
|---|
| Protein accession | YP_001545762 |
|---|
| Protein GI | 159899515 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
|---|
| TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGATG ATCGACAGTT GGTGGATGAA ATTTCGGCAG CAACCACGCT GGAATTGCCA
GTGCTTCCAC TCATCAATAC CGTGCTTTTC CCAACAATGG TCACCCCACT TTTTGTAGCC
CGCGAGCTAT CAATGGCTGC GATCGAGGCG GCGATGAGCG CCGATCGGCA AATTGTCGCG
GTAGCGCAAC GCGCAATTGA AATCGAGGAG CACGATACCA GCCAACTGTA TCAGGTCGGG
GTGATTGCCC ATATTGAGCG GGTGCTCAAA CTGCCCGATG GCACAACCTC GGTCTTGGTG
CAAGGCCAAC AGCGGGTGCA AATTGTCGAT TGGCTGGCAA CTGAACCCTA CATTAATGCG
CAAGTGCAAA TCATCGAGCC AGATCATGAA TCGAGTTTGG CGATTGAGGC CATGATGCGC
GGCGTATTGG CTTCCTACGA AAAAGTGGTC AAACTAAGCC GCACTATGCC CGATGATGCC
TATGTTGCGG CGCTCAACCT TGAAGATGCG AGCGCCTTGG CCGACTTAAT TGCCTCGACC
TTGCCGCTTG ATATCGTGCG TCGCCAACAA TTGCTCGAAC TTTTTGAGGT CGAGGAGCGC
TTGCGGCGGC TGAGTGTGGT GCTCTCACAA GAGATTGATG TGCTTGAATT AGAGCATCAT
ATTCAAAATC AGGTGCAAAA AGAGGTCGAT AAGTCGCAAC GTGATTTCTT CCTGCGCGAA
CAACTCAAGG CCATCCAAAC CGAGCTGGGT CAAGAAGATC CATTGACCCG CGAATTGAAT
GAACTGCATG ATCGGATTGT TGCGGCCAAT TTGCCTGCCA AAGCCCAAGC CAAAGCCTTA
GAAGAACTTG GCCGCTTGGA GATGATGCCG CCAGCCGCAC CCGAATATAG CGTTATTCGG
ACGTATTTGG ATTGGTTGCT AGAACTGCCT TGGTCAAAAA CCAGCGCCGA TGTTGCTGAT
CTTGAAGTGG CGGCCAAGGT GCTCGAAAAC AACCACTATG GCTTGAAAAA AGTCAAAGAA
CGGATTTTAG AATTTATCGC CGTGCGCATG CTGGCTGGTG ATAGTACCAA ATCGCCAATT
TTATGTTTTG TTGGCCCGCC AGGTGTCGGC AAAACTAGCC TTGGCCGTTC GGTCGCCGAG
GCGTTAGGCC GCGAGTTTGT GCGGCTTTCG CTTGGTGGCG TGCACGATGA GGCTGAAATT
CGTGGCCATC GCCGCACCTA TATTGGAGCC ATGCCAGGCC GCATCATCCA AACCATGAAA
GATGCAGGCA CGATCAACCC AGTTTTTATG CTTGATGAGA TCGATAAGCT GGGCAATGAT
TTCCGCGGCG ATCCAGCGGC GGCCTTGCTT GAGGTGCTTG ATCCTGAGCA AAATAATACC
TTTGCCGATC ACTACCTTGA TCTGCCGTAT GATCTTTCGA AGATTATGTT TATTACCACC
GCCAACATGC TTGACCCAAT CGACGAGCCA TTGCTTGATC GGATGGAGAT TGTTGAGCTA
CCAGGCTATA TCGAAGAAGA AAAAGTGCAA ATTGCCCGTA AATTCTTGAT TCCCAAGCAA
ATCGAAGCTA ACGGTTTAAA GCAACATCCA ATTACGATCA GCGATGAAGC CTTGCGCCAA
ATCATTCGCA CCTACACCTG GGAAGCGGGC GTGCGCAACC TTGAGCGCGA AATTGGCGGT
ATTTGTCGCA AAATTGCTCG CCGTGTTGCC GAGAAAAAGC GCTATCCACG CCGAATCACG
CCAACCATGC TCACCGATTT CCTTGGTCAG CCGCCGTTTG ACTACAGCCG CGCCAATGAT
CGTGATGAAA TTGGGGTAGC GACAGGCATG GTTTGGTCGA GCAACGGCGG CGATGTGGTC
GCAATCGAAA CCGCGATTGT TGATGGCAAA GGCACAACGA CCCTCACTGG CCAACTTGGC
GATGTGATGC AAGAATCGGC CCAAGCAGCG CTTTCGTATG CCCGAGCTTC ATCGCGCCGT
TTAGGCATCG ATGGCAAACG CTTCGAAAAA ATCGATATTC ATATTCACGT ACCCGAAGGC
GGTGTGCCCA AAGACGGGCC ATCGGCAGGG ATTACCTTAG CCTGTTCGGT GATTTCAGCC
TTAACTCATC GGCCATTGCG TCGCGATGTG GCCATGACTG GCGAAATTAC CCTACGCGGG
CGGGTGCTGC CAATCGGCGG GTTACGTGAC AAAATTTTAG GGGCATATCG CGCAGGCATC
ACCACCATGC TGATTCCCAA AAAGAATTTG CGTGATTTGG AAGAAGTGCC CAACAATGTG
CGCCGCCAAA TAACCGTGGT TGCGGTTGAA CATATGGATG AGGTCTTGCC AATTGCCTTT
GTCTCGAACC CGCTTGAGCG CGGTAGCCAA CACACCAGCG ACGGCGATCA AACCAGCGTG
GTACTACCGA CGATCACCCA ACCGCAGCTT GGATCAGTCG AATTGTGA
|
|---|
| Protein sequence | MADDRQLVDE ISAATTLELP VLPLINTVLF PTMVTPLFVA RELSMAAIEA AMSADRQIVA
VAQRAIEIEE HDTSQLYQVG VIAHIERVLK LPDGTTSVLV QGQQRVQIVD WLATEPYINA
QVQIIEPDHE SSLAIEAMMR GVLASYEKVV KLSRTMPDDA YVAALNLEDA SALADLIAST
LPLDIVRRQQ LLELFEVEER LRRLSVVLSQ EIDVLELEHH IQNQVQKEVD KSQRDFFLRE
QLKAIQTELG QEDPLTRELN ELHDRIVAAN LPAKAQAKAL EELGRLEMMP PAAPEYSVIR
TYLDWLLELP WSKTSADVAD LEVAAKVLEN NHYGLKKVKE RILEFIAVRM LAGDSTKSPI
LCFVGPPGVG KTSLGRSVAE ALGREFVRLS LGGVHDEAEI RGHRRTYIGA MPGRIIQTMK
DAGTINPVFM LDEIDKLGND FRGDPAAALL EVLDPEQNNT FADHYLDLPY DLSKIMFITT
ANMLDPIDEP LLDRMEIVEL PGYIEEEKVQ IARKFLIPKQ IEANGLKQHP ITISDEALRQ
IIRTYTWEAG VRNLEREIGG ICRKIARRVA EKKRYPRRIT PTMLTDFLGQ PPFDYSRAND
RDEIGVATGM VWSSNGGDVV AIETAIVDGK GTTTLTGQLG DVMQESAQAA LSYARASSRR
LGIDGKRFEK IDIHIHVPEG GVPKDGPSAG ITLACSVISA LTHRPLRRDV AMTGEITLRG
RVLPIGGLRD KILGAYRAGI TTMLIPKKNL RDLEEVPNNV RRQITVVAVE HMDEVLPIAF
VSNPLERGSQ HTSDGDQTSV VLPTITQPQL GSVEL
|
|---|
| |