| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_2965 |
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| Symbol | |
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| ID | 5734837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 3739678 |
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| End bp | 3741018 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641280109 |
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| Product | L-seryl-tRNA(Sec) selenium transferase |
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| Protein accession | YP_001545731 |
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| Protein GI | 159899484 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1921] Selenocysteine synthase [seryl-tRNASer selenium transferase] |
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| TIGRFAM ID | [TIGR00474] seryl-tRNA(sec) selenium transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0158372 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGTTTGC GCAATTTGCC AGCGGTACAT GGGCTGATTG GCCTGTTGGC CGAGCGTTTC
CCCGAACTGC CTGCTCAATG GTTGCTTGAG GCCGCCCGAA CCAGCCTTGA GCAGGCTCGC
CACGCGATTC GTTCTCACGC TGCTGTTCCA TCAACTAAAC AAATTGTGGC TCATGCGGTG
GACTTAATTC TCCAACGTCA ACAACCACCA CTGCGCCACG TGATCAATGC CACAGGCGTG
ATTTTACACA CCAATCTTGG GCGTGCACCG CTCAGTGCTG CTGCCCATCA GGCCATAATT
ACGGCCAGTG CTGGCTATAG CAACCTCGAA TACGATTTGG CGCAAGGCGA GCGTGGTTCA
CGCAATAGCC TGTTGGAGCC ACAACTGCAA CGCTTAACCG GAGCCGAAGC GGCATTAGTG
GTCAATAATG CGGCGGCGGC AATGTTGCTT TGCTTGAGTT GTTTTGCCCA AGGGCAGGAA
GTAATTGTGA GTCGTGGCCA TGCGGTTGAA ATTGGCGGCG GCTTTCGAAT TCCTGATATT
TTGCGCCAAA GTGGTTGCAT TTTAGTCGAT GTTGGCACGA CCAATCGCAG CTATTTGCCC
GATTATACGG CGGCGATCAC CAACCAAACC GCAGCGTTAT TGCATGTCCA TGCCTCGAAT
TTTCAGGTGC TGGGCTTTAC CCACGAGCCA AGTGTGGCCG AATTAGCCCA AGCCGCCCAT
GAGCATCAAA AGCTCTTAAT TTGCGATCTT GGCAGCGGTG CGTTGTTAGA TACCCAGGCC
TATGGATTGG TAGCCGAGCC AACAGTTGCC ATGATGGTTC AAGCCAAGGC TGATTTAGTA
GTGTTCAGCG GCGATAAATT GCTTGGTGGC CCGCAAGCAG GGTTGATTGT CGGCAAACGC
CAGCTGATCG ATCAACTGCG CAAACATCCA TTATTGCGGG CGCTACGAGT TGATAAATTG
ACAATTGCCG CCTTGAGTGC CACGCTTTTG GCCTATGAAA CCCAGCGAGC GAGCAGCGAA
ATTCCAATCT GGCGCATGGT CACCAGTTCG CTTGATGAAT TAGAACAACG CGCACTACCG
CTGCTGGCGC AATACCCCGC TGCCGAACTT GTGGCAACTC ATGCTACCAT TGGCGGTGGT
TCGCTGCCTG GTTCAAGCTT GCCAAGCCGA GGGCTAGCCC TTGACGGCAT GGCTGAAGCT
TTGAGCAAAC AACTTCGTGC CAACGACCCA CCCATTGTTG GTCGAATTCA AGCGCAGCGC
CTAATCCTTG ATCTGCGGAC TGTGCTACCT GAGCAGGATG CAGTGCTTAT GGCGGCGTTA
GCAGCCCTCG ATCCAGCCTA A
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| Protein sequence | MSLRNLPAVH GLIGLLAERF PELPAQWLLE AARTSLEQAR HAIRSHAAVP STKQIVAHAV
DLILQRQQPP LRHVINATGV ILHTNLGRAP LSAAAHQAII TASAGYSNLE YDLAQGERGS
RNSLLEPQLQ RLTGAEAALV VNNAAAAMLL CLSCFAQGQE VIVSRGHAVE IGGGFRIPDI
LRQSGCILVD VGTTNRSYLP DYTAAITNQT AALLHVHASN FQVLGFTHEP SVAELAQAAH
EHQKLLICDL GSGALLDTQA YGLVAEPTVA MMVQAKADLV VFSGDKLLGG PQAGLIVGKR
QLIDQLRKHP LLRALRVDKL TIAALSATLL AYETQRASSE IPIWRMVTSS LDELEQRALP
LLAQYPAAEL VATHATIGGG SLPGSSLPSR GLALDGMAEA LSKQLRANDP PIVGRIQAQR
LILDLRTVLP EQDAVLMAAL AALDPA
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