Gene Haur_2938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_2938 
Symbol 
ID5734810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp3713179 
End bp3713715 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content48% 
IMG OID641280082 
Producthypothetical protein 
Protein accessionYP_001545704 
Protein GI159899457 
COG category[S] Function unknown 
COG ID[COG4420] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.237457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAACC AAACGCCGCA ACACGATCAT TCACATCAAT TAAGTGCTTT AGCCGCCCGC 
GAACGCGAGT TGATCAAACA TTTAATCGAA CACCCCACGA TTAGCAAAAA TACCAATCAT
CAATTTGAGG CCGACCAAAC CTTTGGTGAG CGTTTGGCCG ATCGAGTAGC GGCGTTTGGT
GGTTCATGGC CCTTCTTGAT CGGCTTTTCC AGTGCTTTGC TCGGTTGGAT GCTGCTGAAC
GGGCTATTCT TGACCAAACC GTTCGATCCC TATCCCTTTA TTTTGTTAAA TTTGGTGCTA
TCGAGCGTTG CAGCCTTGCA AGCGCCAATT ATTATGATGT CGCAAAGCCG TCAGGCCGCC
AAAGATCGGC TTGATGCCAG CAACGATTAT GAAATTAATC TCAAGGCCGA GCTGGAAATT
CAGCGCCTGC ATAACAAAAT TGATGATCTA CGCGAAGCTC AATGGCACGA GCTGGTGCAG
CTCCAACAAG AGCAAATTCG CTTGCTCAAC CAAATTTTAA GCCAACGCCC TGAATAA
 
Protein sequence
MANQTPQHDH SHQLSALAAR ERELIKHLIE HPTISKNTNH QFEADQTFGE RLADRVAAFG 
GSWPFLIGFS SALLGWMLLN GLFLTKPFDP YPFILLNLVL SSVAALQAPI IMMSQSRQAA
KDRLDASNDY EINLKAELEI QRLHNKIDDL REAQWHELVQ LQQEQIRLLN QILSQRPE