Gene Haur_2934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_2934 
Symbol 
ID5734806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand- 
Start bp3709574 
End bp3710158 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content46% 
IMG OID641280078 
Producthypothetical protein 
Protein accessionYP_001545700 
Protein GI159899453 
COG category[S] Function unknown 
COG ID[COG3548] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.000165947 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAC AGCGGTTAGA GGCGTTTAGT GATGGGGTGC TCGCGATTAT TTTGACGATT 
ATGGTGTTGG AGTTGAAAAT TCCTCATGGG GATACTTGGG CTGATATTCA GCCATTAGTG 
CCAGTGTTGC TATCGTATAT TTTGAGTTTT GTGTATATCG GGATCTATTG GAACAATCAT 
CATCATATGT TGCATGTGAC CAACCAGTCC AATGGGGCGA TACTTTGGGC TAATTTGCAC 
TTGTTGTTTT GGCTCTCACT TGTGCCATTT ACGACTGGCT GGATGGGCGA AAATCACTTT 
GCCACGATTC CTACCGCCGC CTATGGGATT GTGATGTTGG GAGCAGGGGT TGCCTATTGG 
GTCTTGCAAG GCACGATTAT TCGCAGCCAA GGCCCAAATT CTTCGCTGGC AAAATTGATC 
GGACGTGATC TTAAAGGTAA ACTCTCGCCC TTGCTCTACA CTGTGGCAAT TGGTTGTGCT 
TTTATTCATC CAGCCTTGGC GGGCTTTTTC TATGTGGCGG TAGCAATTAT GTGGCTCTTG 
CCTGATCGCC GGATCGAATT GCATTTGAAT GAGCTTGAGG ATTAA
 
Protein sequence
MKTQRLEAFS DGVLAIILTI MVLELKIPHG DTWADIQPLV PVLLSYILSF VYIGIYWNNH 
HHMLHVTNQS NGAILWANLH LLFWLSLVPF TTGWMGENHF ATIPTAAYGI VMLGAGVAYW 
VLQGTIIRSQ GPNSSLAKLI GRDLKGKLSP LLYTVAIGCA FIHPALAGFF YVAVAIMWLL 
PDRRIELHLN ELED