Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_2676 |
Symbol | |
ID | 5734541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 3431988 |
End bp | 3432641 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641279818 |
Product | thiamine pyrophosphokinase |
Protein accession | YP_001545442 |
Protein GI | 159899195 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1564] Thiamine pyrophosphokinase |
TIGRFAM ID | [TIGR01378] thiamine pyrophosphokinase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAGCAG TTATTATTGC CGACGCGCCG CAAGCCGATA TTCGGGCGGC CTTGCCTTTA TTGAGTAGTA CCGATTTATT GATTGCTGCT GATGGCGGGG CACGTCATGC CTTGAATCAT GGGGTTACAC CGCATGTGAT TATCGGCGAT TTGGATTCGA TTCAGCCTGC AACCTTGGAG ATTATGCAAG CCCGCAAGGT TGAGATTCAG CGCTTTCCAG CGGCCAAAAA CGAAACCGAC CTCGAATTGG CATTGTTGCT GGCGGCTGAA CGCGGCGCGG ATCAGATTCG GATTCTGGCG GCGCTTGGTG GTCGGCCCGA TATGCATATG GCCAACCAAC TCTTGCTGAC CCATCCAGCC TTGATTGGGC GTGATGTGGC GTTGCTTGAT GCCAATTGGG AAGTGCGCTT AATTCGTGAT CAATTGCAGC TGCAGGGTAA ACTTGGTTTG CGGGTTTCGC TGTTGCCCTT GGGCGATGTT GCGGGAGTAC GTACTGAGGG CTTGCGCTAC CCATTGCGCG ACGAAGATTT GCCAATTGGC CCAGCGCGAG GCGTTAGCAA CGAATTTGCA ACAGAATCGG CCCAAGTCAG CATTCGCTCA GGGCTGTTGT TGGCGATGAT CGAACGCGAG CTACAGTCGG GATACTTGGC TTAA
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Protein sequence | MLAVIIADAP QADIRAALPL LSSTDLLIAA DGGARHALNH GVTPHVIIGD LDSIQPATLE IMQARKVEIQ RFPAAKNETD LELALLLAAE RGADQIRILA ALGGRPDMHM ANQLLLTHPA LIGRDVALLD ANWEVRLIRD QLQLQGKLGL RVSLLPLGDV AGVRTEGLRY PLRDEDLPIG PARGVSNEFA TESAQVSIRS GLLLAMIERE LQSGYLA
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