| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_2614 |
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| Symbol | |
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| ID | 5734492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 3352784 |
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| End bp | 3353557 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641279754 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001545380 |
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| Protein GI | 159899133 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.042976 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACAT TCGATTTAAG TGGCAAGGTG GCAATCGTAA CTGGGGCATC ACGCGGAATT
GGTGAGGCAA TTGCCCAACA TTTTGCCCAA GCCGGAGCCA AAGTCGTGGT TTGTGCCCGT
AAATTGGAGA GCCTACAAAC CGTCGCTGAT AGTATTAACC AAGCAGGTGG CACAGCACTC
GCCATGGCCT GTCATACTGG TAAGCCTGAG CAAGTGCAAG CGGTGGTGGC ACAAACTTTG
GCAGAATGGG GTCGAATCGA TATTGTGGTT AATAATGCGG CCACCAATCC CCACTTTGGC
CCGTTGCTCA ACTCCGATGC ATCTCAATGG GATAAAACCT ACGAAGTCAA TGTAAAAGGC
TATTTTTGGT TGATCCAAGC AGCAGCTGAG GCCATGCAGG CGCAAGGTGG TGGCTCGATC
ATCAATGTAG CCTCGGTAGC TGGCTTACAA CCGGCAACTG CCATGGGCAT TTATAGCATT
TCCAAGGCTG CCGTGATAGC TATGACCAAG CAGTTGGCCC AAGAATTAGG CCCAATGAAT
ATCCGAGTCA ATGCCTTGGC TCCTGGCTTG ATCAAAACCA AATTTAGCTC AGCCCTGTGG
GATAACGAGG ATCTGAATCA AAAAATTGTG GCTGGCACGC CCTTAGGCCG AATTGGCACA
GTCGATGAGG TTGCCGCCGC TGCGCTATAT CTAGCCAGCG ATGCTGCTGC GTTCACCACT
GGCACAGTTA TCACCATGGA TGGCGGTAGT TTGGTCGGCG GAATTTTAGG TTAA
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| Protein sequence | MTTFDLSGKV AIVTGASRGI GEAIAQHFAQ AGAKVVVCAR KLESLQTVAD SINQAGGTAL
AMACHTGKPE QVQAVVAQTL AEWGRIDIVV NNAATNPHFG PLLNSDASQW DKTYEVNVKG
YFWLIQAAAE AMQAQGGGSI INVASVAGLQ PATAMGIYSI SKAAVIAMTK QLAQELGPMN
IRVNALAPGL IKTKFSSALW DNEDLNQKIV AGTPLGRIGT VDEVAAAALY LASDAAAFTT
GTVITMDGGS LVGGILG
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