| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_2544 |
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| Symbol | |
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| ID | 5734422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 3266966 |
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| End bp | 3270508 |
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| Gene Length | 3543 bp |
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| Protein Length | 1180 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641279684 |
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| Product | methionine synthase |
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| Protein accession | YP_001545310 |
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| Protein GI | 159899063 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00356448 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAGCA TAAAACCTTA CATCGCCGAA TTGGCGAAAC GTGTTCTGAT TTACGACGGC
GCAATGGGTA CTAGCTTGGA TTTGTACGAT CTCAAGCCTG AGGATTTTGG CGGCGAACAG
TACTTCGGCG CACGCGATTA TCTCGCCTTG ACGCGCCCCG ACATTATCGA ACAAATTCAT
AGCTCGTTTA TGGAAGCTGG GGTTGATGTG TTGGAAACCA ATACCTTCCA ATCAACCCGC
ATTCGCTTGC ATGAATGGGG CTTGGCCGAT AAAACCTACG AGCAAAATTT TAAAGCTGCC
CAACTGGCCC GCAAGGTCGC CGACCGCTAC CAAGCCCAAG ATGGACGCAA ACGTTTTGTG
GCTGGCTCGA TGGGGCCAAC TGGCTTTTTG CCTTCATCCG ACGACCCAAC CCTTTCAAAT
ATTACCTGGG ATGCGCTTTC CGATACTTTT AAAGAGCAAA CCATCGCCTT GGTCGAAGGT
GGGGTTGATG TGCTCTTGGT TGAAACCAGC GTTGATATTC TCGAAGTCAA AGCGGCAATC
GATGGTATTC GGCGCGGCTT GGCCGAACTC AAACGCCCTG ATATTGCGAT TCAAGCCCAA
GTCTTTTTGG ATCTCTCAGG GCGTATGTTG CTAGGCACGG ATATTCAGGC CACCATGGTC
ACGCTCGAAG CCTTGGCCGA TGTTGATGTG ATTGGATTGA ATTGCTCGAC TGGCCCTGAA
CACATGCGGC CAGCGATCAC CTACCTCGCC GCTAACTCCA AATTGCCAAT TTCGTGTATT
CCCAACGCTG GCTTGCCGAT GGAAGTCAAT GGCGAAACCG TGTTTCCGTT GGAGCCAGCA
GGCTTTGCCA AGAGCTTGAC TGAGTTTGTG CAAGATTTGG GTGTGCGCGT CGTTGGTGGT
TGTTGTGGCA CAACTCCGGC CCACCTTCGC GCGTTGGTCG ATTCAATTGG CAATAATTGC
CCACCCAAAC CGAACCAAGC TCCAATTGTT CCACAAGTTT CATCGGCCAT GCGTTCCTTG
GCGCTCCACC AAGATCCAGG CCCATTTATC ATTGGCGAAC GGGTCAACTC GGTTGGTTCG
CGTAAAGTTA AAAAATTGTT GCTCAAAGAT GATTATGATG GTGTGTTGCA AATTGCTCGT
GAGCAGGCCG ATAGTGGCTC GCACGCGCTC GATGTATGTG TTGCCATGAC CGAGCGCCCC
GATGAAAAAG AGCAAATGCA AAAGCTGCTC AAAAAATTAA CCATGGGCGT TGAATTACCA
CTCGTCATCG ACTCAACTGA GTATGAAGTG ATCGACGCAG CGCTGCAAAT CTATCCAGGC
CGCGCGATTA TCAACTCAAC CTCGCTCGAA GGCGGGCGTG AACAGAAATT CGACAAAACC
ATGCCCTTGG TTGCTCGTTA TGGCGCAGCA ATTATCGCCT TGACGATCGA TGAAGAAGGC
ATGGCCCATA CTGCTGAAGC CAAAGTTGCG ATCGCCAAAC GTATGGCCGA AATGGGCCGC
CAAGAATATG GCGTGCAAAA TGATGCTTGG CTCTTTGATG CATTGACCTT TCCATTAACC
ACGGGCCAAG CCGAATTGCG CGAATCAGCC AAAGAAACCA TGGAAGGCAT TCGCCGGATC
AAGGCCGAAA TTCCAGGCGC AATGACGGTG CTTGGGGTTT CGAATCTCTC ATTCGGGATT
CAGCCCCATG CCCGTTCAGC CCTCAACTCG GTCTTTTTAT ATCACGCCGT CAAGGCTGGG
CTTGATGCAG CGATCATCAA TCCAACCCAC GTTATGCCAT TTGCCGAAAT CTCCGCCGAA
ACCCGCAAAG TTTGTGAAGA TGTAATTTTT AACAGCGACG AAGAAGCCTT GCCGCGCTTC
ATCCAATATT TCGAAGCCAA TACAGCGGTT GCTGGCGAAG CCAAAGTTGA CCCAACCGCC
ACCATGAATG CCGAAGAGCG AATTCACTGG AAGATTCTGC ATCGCAAAAA AGATGGCATC
GAAGCCGATA TCGACGAATC GCGGGCATGG CGCGAAGCTG GCGGCCAAAC CCAAGGCGAA
GCAGCGATTG ATATTCTCAA TGGTGTGATG CTGCCAGCCA TGAAAGAAGT TGGCGATAAA
TTCGGCGCTG GTGAATTGAT TCTGCCCTAT GTGCTGCAAT CTGCCGAAGT GATGAAACGT
GCCGTCGCCC ATCTCGAACA ATTCCTTGAT CGGGTCGAAG GCACAACCAA GGGTAAAGTT
GTGCTAGCCA CGGTCTATGG CGATGTGCAC GACATTGGCA AAAACTTGGT TTACACGATT
TTGTCGAATA ACGGCTACAC CGTTTACGAC CTTGGCAAGC AAGTTCCAGT CAATACAATC
ATCGAAAAAG CGCTTGAAGT TGGGGCCGAT GCAATTGGGC TTTCGGCTTT GTTGGTCAGC
ACATCCAAGC AAATGCCATT GTGTGTGCAG GAGTTGCACA AGCGTAATTT GGCTTTCCCA
GTGCTGGTTG GTGGCGCGGC AATCAATCGC CAATATGGCC AACGTATTCT CTTCCCTGAG
CCAGAAGTGG CCTACACTGG TGGGGTTTTC TATTGCAAAG ATGCCTTTGA AGGCCTCGAA
ACCATGGATA AACTCTCCGA CCCAACTGTG CGCGAAGAAT ATTTGAGCGT GATGGAAGAT
GCTGCCCGCG AATCGTTGAA AGCGCCAGAG CGAGGTCGCA CCCTGTTGGA AAAACTGGGC
AAAAATAATC CTAGCGGTGT GCGTTCAACC ACTCGCAACG ATAATCCAGT GCCAACTCCA
CCGTTCTGGG GCGTACAAGT TGCCAAAAAA ATTCGGCTCG ATGATGTTAC GCCATATCTT
GACCTGAATA CGCTTTGGCG TTTGGGTTGG GGCATCAAAA ACCTCAAGGG CGCTGAATAC
GATCGAGTGG TCAATGATGA GTTCAAACCA CGGTTGCGCC GCATGATCGA CGATGCCAAG
CGCAATGGTT GGCTGCAACC ACAAGCAGTC TATGGCTATT TCCCAGCTCA AGCCGCTGGC
GAAGAGTTGG TGGTCTATGA TCCTAAGGAT CGCAAAACCG TGCTGACGCG CTTTGCCTTC
CCGCGCCAAC CAAGCCGTGA ACGCTTATGT CTAGCTGATT ACTTCCGACC TGTTGAAAGC
GGCGAATTCG ATGTGGTTGG CTTGCAAATC GTCACCATGG GCCATGTTGC AGCTGAGCGC
GTTGAAAGCT TGCAAAAAGC CAACGATTAT AGCGAATCGT TCTTTAGCCA TGGCTTGAGC
ACAACCTACG CCGAAGCACT CGCCGAATTT ACCAACAAAA TTATCAGCCA AGGCTTAGGT
TTGAGTTATC AGGCTAAACG CTACTCGTGG GGCTACCCAG CCTGCCCCGA TCTTGAGGAG
CATACCAAGC TGTTTAGTGT TTTGCCCGCC AAAGAGATCG ATGTCAGTTT GACCTCGGCC
TTCCAACTAG ACCCTGAGCA AAGCACCGCC GCCATCGTCG TGCATCACCC TGATGCTAAA
TATTTCTCAA TTGGCTCAGT CGCCGAACGC GCCGAAAGTG ATGTCGCCGA GCTGACCAGT
TAA
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| Protein sequence | MTSIKPYIAE LAKRVLIYDG AMGTSLDLYD LKPEDFGGEQ YFGARDYLAL TRPDIIEQIH
SSFMEAGVDV LETNTFQSTR IRLHEWGLAD KTYEQNFKAA QLARKVADRY QAQDGRKRFV
AGSMGPTGFL PSSDDPTLSN ITWDALSDTF KEQTIALVEG GVDVLLVETS VDILEVKAAI
DGIRRGLAEL KRPDIAIQAQ VFLDLSGRML LGTDIQATMV TLEALADVDV IGLNCSTGPE
HMRPAITYLA ANSKLPISCI PNAGLPMEVN GETVFPLEPA GFAKSLTEFV QDLGVRVVGG
CCGTTPAHLR ALVDSIGNNC PPKPNQAPIV PQVSSAMRSL ALHQDPGPFI IGERVNSVGS
RKVKKLLLKD DYDGVLQIAR EQADSGSHAL DVCVAMTERP DEKEQMQKLL KKLTMGVELP
LVIDSTEYEV IDAALQIYPG RAIINSTSLE GGREQKFDKT MPLVARYGAA IIALTIDEEG
MAHTAEAKVA IAKRMAEMGR QEYGVQNDAW LFDALTFPLT TGQAELRESA KETMEGIRRI
KAEIPGAMTV LGVSNLSFGI QPHARSALNS VFLYHAVKAG LDAAIINPTH VMPFAEISAE
TRKVCEDVIF NSDEEALPRF IQYFEANTAV AGEAKVDPTA TMNAEERIHW KILHRKKDGI
EADIDESRAW REAGGQTQGE AAIDILNGVM LPAMKEVGDK FGAGELILPY VLQSAEVMKR
AVAHLEQFLD RVEGTTKGKV VLATVYGDVH DIGKNLVYTI LSNNGYTVYD LGKQVPVNTI
IEKALEVGAD AIGLSALLVS TSKQMPLCVQ ELHKRNLAFP VLVGGAAINR QYGQRILFPE
PEVAYTGGVF YCKDAFEGLE TMDKLSDPTV REEYLSVMED AARESLKAPE RGRTLLEKLG
KNNPSGVRST TRNDNPVPTP PFWGVQVAKK IRLDDVTPYL DLNTLWRLGW GIKNLKGAEY
DRVVNDEFKP RLRRMIDDAK RNGWLQPQAV YGYFPAQAAG EELVVYDPKD RKTVLTRFAF
PRQPSRERLC LADYFRPVES GEFDVVGLQI VTMGHVAAER VESLQKANDY SESFFSHGLS
TTYAEALAEF TNKIISQGLG LSYQAKRYSW GYPACPDLEE HTKLFSVLPA KEIDVSLTSA
FQLDPEQSTA AIVVHHPDAK YFSIGSVAER AESDVAELTS
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