Gene Haur_2540 details

Gene Information

• Locus tag: Haur_2540
• ID: 5734418
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Herpetosiphon aurantiacus ATCC 23779
• Kingdom: Bacteria
• Replicon accession: NC_009972
• Strand: -
• Start bp: 3257625
• End bp: 3262463
• Gene Length: 4839 bp
• Protein Length: 1612 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 641279680
• Product: hypothetical protein
• Protein accession: YP_001545306
• Protein GI: 159899059

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.316751
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGCTTG ATTTCGATTC CAATGATATT CAATTGAACA AAGGCGATAT TCGTCAATTG 
CAAAATGCCG ATGCGTTGGC GGGCTTTTTG GCGCGTTTGC AGTATGCGAT CGATGTGCGC 
ACAACGATCG ATTCGTATGC TCAGGTTGGC CTCGATAGCG CCTATTTGCG CCAAGAAATT 
AAGCATCTGG AGTTGTTGGC AACCGATCCC CACGATCAAG AAATAAAAAT TTATTTGTTA 
GAAGTGCGCT CACTCACCGC TGCTTTACGC AATGCTATCG CCCGCGCGTT TCGCGATCGG 
CCTGAGTTGG CGTTGGTTAT TTTGACCAAA GATTATGAGA GCTTTGAGTT TGTGATCTTG 
CTGCGCGAGT TGGCGCAAAA TACCCAGCGT GGCGCGGCGA TTCGCCAAAT GTTGCGGCCT 
GTGCCACTCA CGATCAATCG TTTGCATGTT TCGGATGTAG CGTTGCGCGT GCTCAAACGC 
TTTACCATGA CCGAACCCGA TGCGCTGTAT CAGTGGGATA AGCTGCGCTC GGCCTTTGTG 
TTGGCCGAGT GGAGCGAGCA ATATTTTAAT AATCGGGCGC TGTTCTCGGA TTATTATTTG 
AAACATCGTT TGACTGATGC CAAATTAAAT GCTGAATGGA ATGAAGATGT GTTGCCAATT 
GGCCGCAAAA TCAACCCGCT GCTCAAAACT GCCCGTCAAC AATTAACTGA TCAGCCTCTT 
GCGACGATGC AAAAGCAATT TTATGCGCCA ATCTTGGCGG ATTTGGGCTT TGTGCTGCAA 
GCGGTCGCGG GTGAGCCAGC CTATCGCTAC GATTTGGCCT TGCCCAATAA TCCCCAACCA 
GTCGCTGCTT TTTTTGGCTA TGTTTGGAAT CGTAATTTAG ACGATCAAGA TAGCCAGCGC 
GATCCCGCTA CGCCGCTGAT CATTCCTGGG GCCGAGGTGG TTTCGACGCT TGAGGCTGGC 
ACGGTGCCAT GGGTGATTGT GAGCAATGGC AAATATTGGC GCTTATATTC AACCACTGCC 
AGCAATAAGG CTACCAACTA CTACGAGGTT GATTTAGAAG AGGCTTTCGG GGCGCAGGAT 
GCGCTGGTTG CACTCAAATA TTGGTGGTTG TTTTTTCGTG CTCAGGCGTT CGGCGGATTT 
TTGGAGCGCT TGCTCAAACA ATCGGCGGAG TATGCCAAGG GCTTGGGCGA ACGCTTGAAA 
GATCGGGTGT TTACTGAGAT TTTTCCCCAA TTTGCCCAAG GTTTTATTGC CGACATGCGC 
CGCCAAGGTG CTAACGACGT TTCTGAGCAG CAACTCAACC CGGTTTTTGA AGGTACGTTG 
ACCTTTTTGT ATCGATTGAT GTTTGTGTTG TATGCCGAAA GCCTGGATTT GCTGCCGCTG 
AATGAACATA ACGGCTATCG CGAACGCAGC TTGTACACGC TCAAACGTGA GATCGCTGAG 
ATTGCTGGTA GCTTGCTCGA TCAGCGGGCG GCCAATTTGC AAGCCCACTA CAGCGCCACT 
TCAACCGCGC TTTATCAGCG CATCCTCGAT TTGTGTGCGG TGATCGATCG TGGCTCGCCC 
GATTTGAATA TGCCAACCTA CAACGGTGGT TTGTTTAGCG CAACTAGCAC GAGCGGCCAG 
TTTTTGCAAC GCTACGCCGT ACCCGATCGC TACTTGGCCT TGGGCTTGGA TCGGCTTGCC 
CGCGATCTTG ATGATCGGAG CCAAGCATTA GTATTGATTG ATTTTAAGTC GTTGGGCGTG 
CGCCAGCTTG GGAGCATTTA CGAAGGTTTG CTGGAATTTA AGTTGCACAT CGCCAGCGAA 
TGCTTGGCCG TGACTAAGGA GAAAGGCAAA GAGGTTTATC AGCCAGCCGC TAAAGTTGCC 
AAACCACTGG CAATTATCGA GCGGGGCATG GCCTATTTGG TCAACGATAA AAAGGAGCGC 
AAGGCCACGG GCAGCTATTA CACGCCCGAT TATATTGTGA AATATATTGT GCAGCAGACG 
GTTGGCGCGG TGCTTGATCA GAAATTTAAG GCCTTGGCTC CGCGTTTGCA CGAGGCCCAG 
AAACAATATC GCAATTATGC TAATTTGGTC GCTGCTCGGG CCAAATCGAG CAAGCGCCCC 
GAAAATCCGG CGGTGTTTTG GACTGACCCG AATGGTGCCA TGGGCCAGTT GCTCGACGAT 
TGTTTGAATC TGCGGGTGCT TGACCCAGCT ATGGGCAGCG GCCATTTTTT GGTTGAAGTC 
GTCGATTTTA TTAGCAATCG CTTGATTCAC TTTTTGAATG CCTGGAGCGA AAACCCCGTT 
TGGGCGATGA TCGACCGCAC CCGCAGCGAA ATTGTGGCCG ATATGGAGCG CCAAGGGGTG 
ACGATTGACC CCGAACGGCT TACGCGGGTG GCGCTGCTCA AACGGGCGGT GCTCAAACGC 
TGCATCTACG GGGTTGACCT GAATGCGATG GCGGTGGAGT TGGCTAAGGT CAGTTTGTGG 
CTCGATGCCT TTACCCTTGG CGCTCCCTTG AGTTTTCTCG ACCATCACTT GAAGCATGGC 
AATAGCCTGA TTGGGGCGCG GGTTGCCGAG GTGCAAACCT ACCTTGATGT TGGTGGCCGC 
CAAAGCCATA TGTTGGCGGG CAACGAGTTT GCAGGCCTGA GCCTGGCCAC CGATTTGATG 
CGCCAAGTCA GTTTTTTGAG CGATAACACG GTTGAACAAG CGCAACAAAG CGCGGTGGCT 
TTTCGCGATG CCGACCAGCA TCTCGCGCCC TTCAAGCGTA TGCTCGATGT TTATACCTCG 
CGTTGGTTTG GCAATCAGCC CGCCAAAAAA AGCAAAAGCG ATTGGGTCAA CATCTTTTTG 
CGCATGCCCA GCATCAAGCC TTGGTTGCAC GATTCCACAG TTAAATTAGA TGATAGCTTG 
ATTGAGGCTA CCAAGATTGG CCAGATTGCG CTTGAAGCCG CTAGCAGCAA GCACTTTTTC 
CATTGGGAGC TTGAGTTTCC CGAAATCTTT TTTGCGCCCA GCACGCCTGG CGGTCAAGAT 
GTGCAGCTCA ATCCCAACGG TGGCTTCGAT GCGGTGGTGG GTAATCCGCC GTATATTAGA 
ATTCAATTTC TAGATAAAAG TGATGTTGAT TATTTTAATA ATATATATCT CTCTCCTAAT 
GGTTCATATG ATATATATAT ATTATTCATT GAAAAAAGTA TTGAATTATT AAATATTAAC 
GGAATTAGTG GATATATATG TCCTAATAAG TTTATGACAA ATGCATATGG GGATAAAATT 
AGGAATATAA TTGGAGAAAG TAGAAATCTT TTTCGTTTAG TTGATTTTGG CGATTATCAA 
TTATTTGAAG GAGCTACTAC GTATTGCTGT TTAGTATTTT TATGTAAAAA TAATAATCGT 
ACATTAGATA TTCCTGTTAT TTCTGTAAAA GATTACATTA ATATAGAAAA TAATAAAGTT 
ATTAAATTTA ATATTGATAA TTTGATTAAT AATAAATGGT ATTTTGGTGT AAATAATGAA 
TTAAATGAAA AAATTAAAAA AGTGGCAGGT AGAGATTTGG GAGAGATTGC TCATCCTCAT 
TATTGTCTTT TTACGGGATT AAATGATGCT TTTGTTGTGA GTGAAAGTGA TATATTTAAT 
TATGAACTTG AGAGAGATAT ATTAAAACCT TTATTAAGAG GACAAGATGT GAAAAGATGG 
GAGGTTTTGC ATGAAAAACT ATATATTATC TATCCATACG AATTATATAA TAATAAAATG 
TCTGTAATTG ATATAAATAA ATACCCAAAT GTTAAAAATT ATTTATTTAA ATTTAAAGAT 
CTATTAATAA ATAGAGTGAA ATTTATTCAA AAAGTAAAAA ATATACACGA ACGAGAATCT 
AGATGGTATG AATATATTGA TCCAAGATCA ACTTATCAAT TTGATCCATT GAAGATAATT 
ACTCCTGAGA TTGCCGGATA TGGATCATTT GTTGTTGATA CCGAAAGTTA TTACTGTCTT 
AATAAAGTAT ATGTTATAAA CCTTGAAAAT GTTGTCGAAA ACCCCTATTA TATTACATCT 
ATCTTAAATT CATCTATTTC TTTCTATATG TTCAAAGATA TATCTACAAA GCTTGCAAAT 
GGTTATTATG AATATATAAC TCAATATTTG AAACAAATAC CCATACCACG CATCGACTTC 
ACGACCGAGC CAAGCGAACG GGAGCAATTA ACGCAGATCG CTATTGATTC GTATACGCAA 
AAAAATGATA ATAATGTATT GACGCTCGTC AATACATTAT TCACCGCTGA GAATCCAATC 
CAATCCAATC CAATCCAATC CAATCCAATC CAATCCAATC CAATCCAATC CAATCCAATC 
CAATCCAATC CAATCCAATC CAATCCAATC CAATCCAATC CAATCCAATC CAATCCAATC 
CAATCCAATC CAATCCAATC CAATCCAATC CAATCCAATC CAATCCAATC CAATCCAATC 
CAATCCAATC CAATCCAATC CAATCCAATC CAATCCAATC CAATCCAATC CAATCCAATC 
CAATCCAATC CGCTATGGCG ATGTTGTCCA CGATCTATTA GCCTACCTCG CCCAACAAAT 
GATCGAGCTG AACAAAGCCA AGCAACAAGC CAGCAAGCGC TTCTTGAATT GGCTCGAAAG 
CCAACTACGG ATTCAGCCCA AAAAAGGCGA AACTGGCCTC GACAGCCTGA CGGGCAAAAC 
GATCATCCAA GGCTACCTTG GCGACTACCA AAAAGGCCAA CGCGCCGTCA GTTGGAGCGA 
CTTCTGGTAT CGGCTGCAAC AAAACCGCAA TCGTTTTGCC GCCAATCTCA GCGAAATCGA 
AGCCAGCATT GCCCAAGCCT ACCGCCAATC GCTCGATGA 

 

Protein sequence

MTLDFDSNDI QLNKGDIRQL QNADALAGFL ARLQYAIDVR TTIDSYAQVG LDSAYLRQEI 
KHLELLATDP HDQEIKIYLL EVRSLTAALR NAIARAFRDR PELALVILTK DYESFEFVIL 
LRELAQNTQR GAAIRQMLRP VPLTINRLHV SDVALRVLKR FTMTEPDALY QWDKLRSAFV 
LAEWSEQYFN NRALFSDYYL KHRLTDAKLN AEWNEDVLPI GRKINPLLKT ARQQLTDQPL 
ATMQKQFYAP ILADLGFVLQ AVAGEPAYRY DLALPNNPQP VAAFFGYVWN RNLDDQDSQR 
DPATPLIIPG AEVVSTLEAG TVPWVIVSNG KYWRLYSTTA SNKATNYYEV DLEEAFGAQD 
ALVALKYWWL FFRAQAFGGF LERLLKQSAE YAKGLGERLK DRVFTEIFPQ FAQGFIADMR 
RQGANDVSEQ QLNPVFEGTL TFLYRLMFVL YAESLDLLPL NEHNGYRERS LYTLKREIAE 
IAGSLLDQRA ANLQAHYSAT STALYQRILD LCAVIDRGSP DLNMPTYNGG LFSATSTSGQ 
FLQRYAVPDR YLALGLDRLA RDLDDRSQAL VLIDFKSLGV RQLGSIYEGL LEFKLHIASE 
CLAVTKEKGK EVYQPAAKVA KPLAIIERGM AYLVNDKKER KATGSYYTPD YIVKYIVQQT 
VGAVLDQKFK ALAPRLHEAQ KQYRNYANLV AARAKSSKRP ENPAVFWTDP NGAMGQLLDD 
CLNLRVLDPA MGSGHFLVEV VDFISNRLIH FLNAWSENPV WAMIDRTRSE IVADMERQGV 
TIDPERLTRV ALLKRAVLKR CIYGVDLNAM AVELAKVSLW LDAFTLGAPL SFLDHHLKHG 
NSLIGARVAE VQTYLDVGGR QSHMLAGNEF AGLSLATDLM RQVSFLSDNT VEQAQQSAVA 
FRDADQHLAP FKRMLDVYTS RWFGNQPAKK SKSDWVNIFL RMPSIKPWLH DSTVKLDDSL 
IEATKIGQIA LEAASSKHFF HWELEFPEIF FAPSTPGGQD VQLNPNGGFD AVVGNPPYIR 
IQFLDKSDVD YFNNIYLSPN GSYDIYILFI EKSIELLNIN GISGYICPNK FMTNAYGDKI 
RNIIGESRNL FRLVDFGDYQ LFEGATTYCC LVFLCKNNNR TLDIPVISVK DYINIENNKV 
IKFNIDNLIN NKWYFGVNNE LNEKIKKVAG RDLGEIAHPH YCLFTGLNDA FVVSESDIFN 
YELERDILKP LLRGQDVKRW EVLHEKLYII YPYELYNNKM SVIDINKYPN VKNYLFKFKD 
LLINRVKFIQ KVKNIHERES RWYEYIDPRS TYQFDPLKII TPEIAGYGSF VVDTESYYCL 
NKVYVINLEN VVENPYYITS ILNSSISFYM FKDISTKLAN GYYEYITQYL KQIPIPRIDF 
TTEPSEREQL TQIAIDSYTQ KNDNNVLTLV NTLFTAENPI QSNPIQSNPI QSNPIQSNPI 
QSNPIQSNPI QSNPIQSNPI QSNPIQSNPI QSNPIQSNPI QSNPIQSNPI QSNPIQSNPI 
QSNPLWRCCP RSISLPRPTN DRAEQSQATS QQALLELARK PTTDSAQKRR NWPRQPDGQN 
DHPRLPWRLP KRPTRRQLER LLVSAATKPQ SFCRQSQRNR SQHCPSLPPI AR