| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_2523 |
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| Symbol | |
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| ID | 5734401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 3225503 |
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| End bp | 3229087 |
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| Gene Length | 3585 bp |
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| Protein Length | 1194 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641279663 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_001545289 |
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| Protein GI | 159899042 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGATA TTGACGATTC ATCACAGCTA ACAGATCTGC CTGGATGGTT GCGCAATGGC
GGTATTGCTG GGGCTATGCT ACAAAGCATT GACTGGGCCA AGCATCCCCT TGGGCCAATT
GATCAATGGC CAAGCGCCTT GCAGACTGCA CTCAGTATGG TGTTGTATGC ACCGATTCCA
ATGGCATTAA TTTGGGCGGC ATCGCAGACA ACTTTCTATA ATGACGACTA TATTGAATTG
CTCGGCAACA ATCACCCCCA ACAGCAAGCT CAAACCACAG ATCCAGCAGG TTACTTTGGC
CAGCACGCCA TTTTTAGCGC AATTCAACAA GCCCAACTTG GTCAAACCAA GCTGCTGACA
GCTCATTCAA TCGATCAACC ACAACAACAC TGGCTGATCG ATTTGTCGTT TAGCCCAATT
TATGCGGAGC ATGGCACCAT TGTCGGGGTG CTCAATACGG TCAATCAGAT CAATCGTGTG
CCGCAGCTAG CCCAGCCAGC ACCAAGTAGC CAAACCCCCT TTTTGGATTT GTTACAGCAG
ATCGAACTCC CTTTAGAGCA AATACCCAGC TTTCAGCCCG ATCAAGACCG AATCGCCCCA
CTGATCGGCT ATGTTGATCG CCATGGCGCT TATCGCTTTA ATAATCCTGC CTACCAAGCC
TGGTTTCAGC GACCACTCAG CCAAATAACC GGCTCTCGCG TGGCTGAAGT GTGGGGAGAA
ACCGCCTATC AGCAATTTTA TGACCACATT CATCAAGCTT TGCTTGGCCA AGCGGTCGCC
TTTGAGACCG TTATCAGCCT GGAAGATCAG CCTATTCGCA GCGTAGCAGT TGAATATCAG
CCCGATTTAA ACACCGATGG CGAAGTCCAA GGATTTTTCA GTTTCATTAG CGATATCAGC
ACCAACAAAA AATTAACTGT CGCGGTACAA GAATCCAAAC AACGCTTTAA TGCAATTTTT
CAAACCAGTT CCAGCCCAAT GGTCATTACC CGATTAAACG ATGGCCTTAT TTTAGAAGTC
AATGAAAGTT TTAGGCATTT GCTCGGCTAT CAACGAGTTG AGTTAGTTAA TCAGCCAATT
CAAGATCTGA ATATTTTTGT TGATCTGAAT GATCGTGCTG CGATGGTTCG AGCACTCAAA
AAACAAAGCT ATGTCAGCGA TTATGAATTA GAAATTCGGA CTAAATCAGG TGAAACAATT
TTCGTGATTT GTTCAATGAC ATTAATTGTA TTGAGTAATA GTTTATGCGG CTTTACGGTT
ATTCATAATA TTAATAATCG CAAAATCTAT GAACGTAAGC TCAAAGAGAG CGAAGAACGC
TTACAAATCG TGATTGAAAA TCTTAATGAA GGCATCGTCT TATCAGATCT TGATGGCAAT
CTATTTCATT GGAATCGGGT TGCATTGGCG ATGCATGGTT TTGCAAACAT GGAGGAATGT
CGTAGTCGCA TTCCTGATTT TAAAGATTTC TATGAAATTA GCACGCTCGA TAACCAAGTA
CTAGAGATTG AGCAATGGCC CATGTCGCGG TTGATTCGTG GCGAAATTTT AGAATCAATC
GAGTTAAAAA TCCGCCGCAT TAACACACCA GTCGTCTGGG AACGAATTTT TCGCTATGGC
GGAGCAACCG TCATCGATTC ATCAGGCCAT TCAGTCGCAT TTTTAACGAT TAACGATATT
ACTGAACGTA AATATGCTGA GGAAAAATTA CGCTATCAAG CCAATTTACT AGCCTATGTT
TCAGATGCAA TTATTTCAAC TGATAGTAAT TATGTGATCA AAAGCTGGAA CCGTGCTGCC
GAAGAAATTT ATGAATGGCA AGCACACGAG GCAATTGGCC AACGTTTTGG GTCGTTAATC
CCGACCGAAT ATATTCATAA CGATTCAAAT GAGCAAGCAG GCACTCAATT ATTTGAACAA
GCGTTCTGGC AAGGTGAAGT CTATCAATTC GATCGGTATG GCCAACGTCA TCATATCCTT
AGTAGCGTTT CGCTGATCAA AAATAATCAT GGTCAAATTC AAGGCACTGT GGCAATTAAC
CGTGATATTA CTGCTTATAA ACAAGCAACT CAAGCCTTAC AAGAGAGCGA ACGGCGTTTC
AAAATTCTAA CTGAATCATT ACCGCAATTA ATTTGGACCT GTACTCCTGA TGGAAAATGC
GATTATCTAA GTCAGCAATG GGTGCATTAC ACTGGTATTC CTGAATCTGA ACAATTAGGT
ACAGCCTGGA TTAAACAAAT TCATCTTGAT GATCAAGCTT CAATTATGCA GGAATGGCAG
TATGCGCTTG CTACTCAACA AAAGTTGCAC AGTGAATATC GAATTCGTCG TTATGATAAT
ACCTATCGCT GGTTTGATAC TCAGGCGGTG CCTTTATTGG GCCATAACGG CGAAATTATT
AAATGGTTTG GTGCTAGCAA CGATATTGAT GATCGTAAAC GAGCTGAAGA TGCCCAATTA
CGTAGCCAAA AGATGGAGGC CTTAGGCACG CTTGCTGGCG GAATTGCCCA TGATTTTAAT
AATATTTTGC TAGCAATTAC TGGCAATACC CAATTAGCCA TGTTTGATCT TGATCCACAG
CATCCAGTAC AAAATAATTT ACGCGAAATT GAGCAAGCTG GCGAACGAGC AACCGATTTA
GTCCGCCGAA TTTTAACGTT TAGCCGCCAG CAAGAGGTTA AACGTGAAAT TGTGCTGCTG
CCAACCATTA TCGATGAAGC AATCAAATTA TTACGCGCTA CCTTGCCTGC CATGGTTGAA
ATTCAGGTAA ATATCGTTGG GCAAATTCCG GCAACCGCAG CCGATCCAAC CCAAATTTTC
CAGATCATTA TGAATTTAGC GACCAACGCG GCTCATGCGA TTGGCAATAA TCGGGGATTA
ATTGAAATTC GCTTGGATTT AGTCCATCTG ACTGCTGAAT TATCGCGTAC AATTCCAAAT
TTACACGAGG GCCATTATGT GCGGCTATCG GTGAGCGATA ACGGTTGTGG CATGGATAAA
GAAACCATCA AGCGGATTTT TGACCCATTT TTTACTACCA AGCCGCTGGG CGAGGGCACA
GGGCTGGGAT TATCAGTCGT TGATGGAATT ATGAAGGGCC ACGATGGGGC GATTACGGTT
TATAGCCAAA TTAACAAAGG CTCAACCTTC CGGCTCTACT TTCCGGCGAG CAACCAGCTA
CCAACCCCAA CCCCACCGAA ACGTCAGATC GTCTCGGAAA ACGGCTACGC GCATATTTTG
TATATTGATG ATGAACAAGC CTTAGTAACC TTGGCAGTTA AAATGCTCAA CACCTTGGGC
TATGGCGTAA ATGGCTTCAC TAACCCTCAA GCAGCCTTGG ACTATTTTCT GCGCGACCCC
AGCGCAATCG ATGTGGTGAT TAGCGACGTT TCAATGCCGC ACATGTCGGG TTTTGATTTG
GCGAAACAAT TATTGGCGAT CAAGCCCAAT TTACCAATTA TTTTGACCTC AGGCTATGTG
CGGCCTGAGG ATTACGAACT AGCTCAAGTT TTGGGCATTC GTTCATTGAT TTTAAAGCCA
CATACCTACG AAGATTTAGG CTATACCCTC GCCCAAATTC TTTAG
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| Protein sequence | MPDIDDSSQL TDLPGWLRNG GIAGAMLQSI DWAKHPLGPI DQWPSALQTA LSMVLYAPIP
MALIWAASQT TFYNDDYIEL LGNNHPQQQA QTTDPAGYFG QHAIFSAIQQ AQLGQTKLLT
AHSIDQPQQH WLIDLSFSPI YAEHGTIVGV LNTVNQINRV PQLAQPAPSS QTPFLDLLQQ
IELPLEQIPS FQPDQDRIAP LIGYVDRHGA YRFNNPAYQA WFQRPLSQIT GSRVAEVWGE
TAYQQFYDHI HQALLGQAVA FETVISLEDQ PIRSVAVEYQ PDLNTDGEVQ GFFSFISDIS
TNKKLTVAVQ ESKQRFNAIF QTSSSPMVIT RLNDGLILEV NESFRHLLGY QRVELVNQPI
QDLNIFVDLN DRAAMVRALK KQSYVSDYEL EIRTKSGETI FVICSMTLIV LSNSLCGFTV
IHNINNRKIY ERKLKESEER LQIVIENLNE GIVLSDLDGN LFHWNRVALA MHGFANMEEC
RSRIPDFKDF YEISTLDNQV LEIEQWPMSR LIRGEILESI ELKIRRINTP VVWERIFRYG
GATVIDSSGH SVAFLTINDI TERKYAEEKL RYQANLLAYV SDAIISTDSN YVIKSWNRAA
EEIYEWQAHE AIGQRFGSLI PTEYIHNDSN EQAGTQLFEQ AFWQGEVYQF DRYGQRHHIL
SSVSLIKNNH GQIQGTVAIN RDITAYKQAT QALQESERRF KILTESLPQL IWTCTPDGKC
DYLSQQWVHY TGIPESEQLG TAWIKQIHLD DQASIMQEWQ YALATQQKLH SEYRIRRYDN
TYRWFDTQAV PLLGHNGEII KWFGASNDID DRKRAEDAQL RSQKMEALGT LAGGIAHDFN
NILLAITGNT QLAMFDLDPQ HPVQNNLREI EQAGERATDL VRRILTFSRQ QEVKREIVLL
PTIIDEAIKL LRATLPAMVE IQVNIVGQIP ATAADPTQIF QIIMNLATNA AHAIGNNRGL
IEIRLDLVHL TAELSRTIPN LHEGHYVRLS VSDNGCGMDK ETIKRIFDPF FTTKPLGEGT
GLGLSVVDGI MKGHDGAITV YSQINKGSTF RLYFPASNQL PTPTPPKRQI VSENGYAHIL
YIDDEQALVT LAVKMLNTLG YGVNGFTNPQ AALDYFLRDP SAIDVVISDV SMPHMSGFDL
AKQLLAIKPN LPIILTSGYV RPEDYELAQV LGIRSLILKP HTYEDLGYTL AQIL
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