Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_2498 |
Symbol | |
ID | 5734379 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 3192485 |
End bp | 3193222 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641279638 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001545264 |
Protein GI | 159899017 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCATG CGGATTTTTG CACAATTGAA TATCCAGATG TGAGCCAACT TGTGTCGTTG TTTGATCTTT TGCCTGATGT GGTGTTTTTT TGCAAGGATC ATGCGGGGCG GTATCAGGTA GTTAATGAAA CCTTGCGGGT GCGTTGTGGT TGTCGTAGCA AGCAAGAATT AATTGGGCGT TTGCCCGAAG AAGTGTTTCC ATTGGAGTTG GGGGCCAGCT ATGCCAGCCA AGATCAGCAG GTGATTCGCT CTGGAGTTGC GCTGAATCAT CGTTTGGAAG TGCATATTTA CCCTGATTTG CGGATAGGTT GGTGTGTGAC TCACAAGCGC CCGTTGCGCG ACCGTAACGG CGTTGTTACG GGCTTGGTTG GTATTTCGCG CGATTTGCGC AGCCCCAATC GCAATGCCCC AACATGGCGG CGCGTGGCTA GCTCAGTCGA ATATTTAACC GAGCATTTTG CTGAAATTGC CACAATTCAA CAATTGGCAA CCATTGCCCA GCTTTCGTTG AGCCAATATG AACGGGCAAT TCAACAGATT TTTGAATTAA CCCCCAAGCA ATTGCTGATT AAAACCCGAA TTGATGCCAG TATCAAGCTG CTGGCGGGCA ATCGCTCGAT TGCAGCGATT GCGGCCACCT GTGGCTATGC TGATCATAGT GCTTTTTCAC GCCAATTTCG GCTGATTACG GGTCTGACCC CTCGCCAATA TCGCCATTTG CTAGGCCGTG ATACTTGA
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Protein sequence | MQHADFCTIE YPDVSQLVSL FDLLPDVVFF CKDHAGRYQV VNETLRVRCG CRSKQELIGR LPEEVFPLEL GASYASQDQQ VIRSGVALNH RLEVHIYPDL RIGWCVTHKR PLRDRNGVVT GLVGISRDLR SPNRNAPTWR RVASSVEYLT EHFAEIATIQ QLATIAQLSL SQYERAIQQI FELTPKQLLI KTRIDASIKL LAGNRSIAAI AATCGYADHS AFSRQFRLIT GLTPRQYRHL LGRDT
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