Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_2398 |
Symbol | |
ID | 5734279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 3055559 |
End bp | 3056665 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641279539 |
Product | LacI family transcription regulator |
Protein accession | YP_001545166 |
Protein GI | 159898919 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAGGC GCAACAACGC AATGAGCAAA AAACTCGAAC AACCAACCCA AACCCTAAAA ACGCCCCGAG GCCGCCGCCC GAATGGCAAT GGCCTTAGCA GCACCACGAT TATGGATGTG GCGCGTGAAG CTGGTGTCTC GTATGCAACT GTCTCGCGAG TGGTCAATAA CAAAGAATAT GTTAAATCGG ATACTCGTGA ACGGGTGCTG AAAGCGATTA CAAGCTTGGG CTATGTCGTC AACCAGCAGG CCAGAAGTTT GGCTGGTGGG CGCTCATATG CAGTTGGGTT GTTGGTGCGC GATCTTGGCT CAAGCTATAT GGGTGAAATT GTGCGCGGGA TTGACGAGTC GCTCAGTGCT GCTCAATACA ATCTGATGCT CTATACCACC CATCGCCGCA AAATCAAAGA ACGGATTTAC GTCAACAATT TGATCCAGGG CATGACTGAT GGGCTGCTCT TGGTTTTGCC AGAAAACCTT GAAGCCTATT TGGAAACTCT TGATCAGACC AACTTCCCCT ATGTCCTGAT CGATCATCAA GGGCTTGACG AGCGCACTCC AGTGGTGATT ACCACTAATT GGCAGGGTGG CTACGATGCC ACGCGCTATC TGATTGAGCT TGGTCATCGA CGGATTGGGT TTCTGACGGG CATGATGGAT ATGCGCAGCT CGCAAGATCG CCTGAGTGGT TATCAAGCAG CGCTGCGTGA CCATGGTTTG CCAGCCGATC CACAACTCGT GTATGAAGGA ACCTATTATC AACCTGAAGG CTACGCTGGG GCACAAAGCC TGTTGCGGCT GCCAGAGCCA CCAACAGCAA TTTTTGCCTC GAACGATGTA ATGGCCTTTG GGGTGATGGA AGCGGTTCGC GATGCCGGAT TGCGGATTCC AAGTGACATC TCGGTGATTG GCTTTGATGA TATTGCGCAA GCCTCGCAGG TAGCACCGCC ATTGACGACG GTCGCCCAGC CATTAGAACA ACTGGGACGC GAAGCTGTTC GAATGTTGCT AGCTCGGATC AATAATCCTG AGCAACCGAT AGCGCGTACC ATTTTGCCAA CTACCTTGAT TATTCGCCAA TCGTGCGACG TTCCTCGGAA CGTGTAA
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Protein sequence | MQRRNNAMSK KLEQPTQTLK TPRGRRPNGN GLSSTTIMDV AREAGVSYAT VSRVVNNKEY VKSDTRERVL KAITSLGYVV NQQARSLAGG RSYAVGLLVR DLGSSYMGEI VRGIDESLSA AQYNLMLYTT HRRKIKERIY VNNLIQGMTD GLLLVLPENL EAYLETLDQT NFPYVLIDHQ GLDERTPVVI TTNWQGGYDA TRYLIELGHR RIGFLTGMMD MRSSQDRLSG YQAALRDHGL PADPQLVYEG TYYQPEGYAG AQSLLRLPEP PTAIFASNDV MAFGVMEAVR DAGLRIPSDI SVIGFDDIAQ ASQVAPPLTT VAQPLEQLGR EAVRMLLARI NNPEQPIART ILPTTLIIRQ SCDVPRNV
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