Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_2322 |
Symbol | |
ID | 5734224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 2962969 |
End bp | 2964534 |
Gene Length | 1566 bp |
Protein Length | 521 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641279463 |
Product | anti-sigma-factor antagonist |
Protein accession | YP_001545090 |
Protein GI | 159898843 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGGCAC GGGTTCGCCA ACGAGTTACC TGGATTATCT TGCTTGCGGC GTTGTTGCCG TTATTAGCGG TGTGGGCAAT CGCCTTGACG ATTAGCTATC GAGCGCAGCA GCGTTCGGCG CAAAATCAAC AAGTGGCGCT CACTAACCTA GCCGCTGAAG ATTATCGACG CTTTGTGCTG AATAGTATGG ATGAGTTGCG CGGCGCTGCT GAAACGCTTG GGAATAATGG GAATCCCAGT CAGTTGAGCG ATTTGCAGTT GGGTTCGCAA GTGCTATTTG GCTCAAGTTT TTCTGAAGTT GGGGTGTATA GCCTGAATGG CGAACGAATC GCAGTGGCGG CACGCTTGCG CGGCGTGCGC ATGCCCGAAT CGTTGGCAGG CTCACCATTA TTGCAAATGG TGCAAAATCG CCAAGTTGCG ATTGAAAACC CTGCGCCCTT GCAAGCCCTC TCCTTGCCAC TTGCTCCCAG CGAAGTGCCG CACTTTCGGA TGGCCTTGCC AATTTTGGGC AATGCCAACG CCCAATTAAT TCTGGTCGCC GATATCAGCA TGGATCGAAT TTGGGAAACG ACTTCGCGGA TAGAATCAGC CGCCCAGATG CGGGTGTTGG TGGTTAATCA ACAAGGCCAA TTAATTAGCG CCGCCAATAC CCAAGCGCTA ATCGAGAATC AAGATTTATC CAGCTTACCC TTGCTGCAAA CTGGCAATTC GATTGAAACC TATCGTAGCC CATTTGGCGA AGAAGTTTTA GGTGTGCGCA CCTCGCTTGA TCCTACCGAT TGGATTTTGA TCGTTGAACG ACCGCTTGAG GTTATTTATA GTAATGTTCA AACCTTGGCA ATTAGTTTGT TGATTGTGAT TGGGATTGCC TTGCCGATTG TGGCGGCGAT TGGTTGGTAT GTTGGGCGGC GATTGGCCTT GCCCGTGCAA AAATTATATG CGAGCGTTAC CCGTTTTACC GATGATCCCA ATGCCTATAC TCCGGTGCAC CTCAACACCC GCGACGAATT GGCTAGCCTT GGCGAGGCCT TCAATACGAT GGTGGTTGGC CTCAATGCCT CGCAAACACG GCTTTCTAAA ATGAATGAAG AGCTTGAAAC GCTGGTTGTG ACCAGAACTG GCGAGTTGAA TCAGGCGTTG GCTGAGGTGC AAGCCCAAAA TCTTGAACAA GAACGCTTGC TCGAAACCGT GCGCCGTTTG AGCATGCCAA CCATCCCAAT TACTAAGCAT ATGCTGGTGA TGCCGTTGGT TGGTGAATTT AGCGCTAATC GGGCTGGCGA TATTAATGCA ACGCTGCTCA AATCGATCGA ACAACAACAA GCCAAAGTTG TAATTATGGA TATTACCGGC GTGCCAGTTG TCGATCAATC GGTGGCGCGA GCCTTGATCA GTGCTTCGCA TGCAGCGCAA TTGCTGGGAG CGCGGGTGAT TTTGGCGGGG ATTCGCCCCG ATATGGCCGA AACCTTGGTT AATTTACAGC TTGATCTTTC AGTGATTGAT ACGGAGGCAA CCTTGGCCCA AGCCTTTAGC CGTGGCACTG AGTATTTGCA AAAGCGTCGG CGCTAA
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Protein sequence | MRARVRQRVT WIILLAALLP LLAVWAIALT ISYRAQQRSA QNQQVALTNL AAEDYRRFVL NSMDELRGAA ETLGNNGNPS QLSDLQLGSQ VLFGSSFSEV GVYSLNGERI AVAARLRGVR MPESLAGSPL LQMVQNRQVA IENPAPLQAL SLPLAPSEVP HFRMALPILG NANAQLILVA DISMDRIWET TSRIESAAQM RVLVVNQQGQ LISAANTQAL IENQDLSSLP LLQTGNSIET YRSPFGEEVL GVRTSLDPTD WILIVERPLE VIYSNVQTLA ISLLIVIGIA LPIVAAIGWY VGRRLALPVQ KLYASVTRFT DDPNAYTPVH LNTRDELASL GEAFNTMVVG LNASQTRLSK MNEELETLVV TRTGELNQAL AEVQAQNLEQ ERLLETVRRL SMPTIPITKH MLVMPLVGEF SANRAGDINA TLLKSIEQQQ AKVVIMDITG VPVVDQSVAR ALISASHAAQ LLGARVILAG IRPDMAETLV NLQLDLSVID TEATLAQAFS RGTEYLQKRR R
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