Gene Haur_2195 details

Gene Information

• Locus tag: Haur_2195
• ID: 5734082
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Herpetosiphon aurantiacus ATCC 23779
• Kingdom: Bacteria
• Replicon accession: NC_009972
• Strand: -
• Start bp: 2785027
• End bp: 2787057
• Gene Length: 2031 bp
• Protein Length: 676 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 641279336
• Product: alpha beta-propellor repeat-containing integrin
• Protein accession: YP_001544963
• Protein GI: 159898716

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.848428
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTTCAT CATCGTGGTT AATGCATTGG TCGCGGCGCA GCATTTGGAT TTTACTGTTT 
GGCTTGTTGT CGATGGGCGT TGGTTTTGGA AGCAAGCCTG CTCCATCAAC GGCTGCTGCC 
TTGTTTACTG CTACTGACTG GCGGGCTATC CGCGCCCTAT TGCCATTGCG GCAACAAGCC 
TATTTCAAGC CTTCGCAGGT CTCTGCGGAC GATGCAATGG GTTGGAGTAT TGCGGTGTCC 
GGCGATACAA TTGTGGTCGG TGCGCCTCAC GAGGACAGTA GCACGGCAGG AGTTCAGAAT 
GGGACGACAC CGACGGTCGA TGAGGTGGCG AGTGATGCGG GAGCCGCCTA TGTGTTTGTG 
CGGACTGGCA CGAGCTGGAG TCAGCAGGCC TACCTGAAAG CGTCGCAGGT AGCGGCAGGC 
GATGGCTTTG GCACCAGTGT GGCGGTGTCC GGCGATATCA TTGTGGTTGG TGCGCCTCAC 
GAGGATAGCG GTACGGTGGG CGTGCAGAAT GGGGCGACAC CGACAATCGA TGAGGCGGCG 
AGTGATGCGG GAGCCGCCTA TGTGTTTGTG CGGACTGGCA CGAGCTGGAG TCAGCAGGCC 
TACCTGAAAG CGTCGCAGGT ATCGGCAGGC GATGATTTTG GTGCCAGCGT GGCGGTGGCA 
GATACAACAG TTGTCGTTGG GGCACACCAA GAGGATGGTA GTACGACGGG TGTACAGAAC 
GGGGCCACAC CGACGGTTGA TGAGGCAACG AGTGATGCCG GAGCAGCGTA TGTGTTCGTG 
CGTGATGGGA GAAGCTGGAG CCAGCAGGCC TACCTGAAAG CTTCGCAGGT TTCGGCAGGC 
GATATTTTTG GTGCCAGCGT GGCGGTGGCA GATACAACAG TTGTTGTTGG GGCACACCAA 
GAGGATAGTA GCACCGCCGG GGTTTTCCAT AGCGCCGCGC CAACGGTCGA TGAGGCGGCG 
AGTGATGCGG GAGCAGTGTA TGTGTTCGTG CGCGATGGCA CAAGTTGGAG TCAGCAGGCC 
TATCTGAAAG CGTCGCAGGT GTCGGCAGGC GATATCTTTG GCTTTAGTGT GGCGGTGGCA 
GGGGAGACGC TGGTCGTCGG TGCGCCCTAT GAAGATAGTA GTACGGCGGG TGTTTCCAAC 
AGTGCCACAC CAACGGTCGA TGAAGATATG ACCAACGCTG GAGCAGTGTA TGTGTTCGTG 
CGCGATGGCA CAAGTTGGGT TCAGCAAGCC TATCTGAAAG CGTCGCAAGT TTCGGCAGGC 
GATATCTTTG GCTTTAGTGT GGCGGTGGCG GGCGATACTA TCGTAGTCGG TGCGCCCCAT 
GAAGATAGTA GTACGTCAGG TGTTTCCAGC AGCGCGACAC CAACGGTCGA TGAAGCCATG 
AGTGATGCAG GGGCCGCGTA TGTCGTCGTG CGCAATGGCA CAACTTGGGT TCAACAAACC 
TACCTCAAGG CTGCCCAAAC TTCAGTGTCC GACATCTTTG GCTTTAGTGT GGCGGTGGCA 
GCAGATACGC TCGTTGTTGG TGTACCCTAC GAGGATAGCA GTACGGCGGG TGTTGATCAT 
AGCACGCTGC CCACGGTTGA TGAGTTAGCA AGCGATGCCG GAGCGGTCTA TGGGTTTACC 
AATCTGCCAA CCTTGTATCT GCCTTTCGTC ACAACCAGTC AGCCATTGGT GATTGCGCCA 
CTCACTCCTG TCGCCGTGCC AACAACTCCA GTTGGTACGC CTGGCATGAT TTTCTTAACC 
AAAACAATCA CGTTGCCAAC CCCATTATCA AGTAGTGGTC ACTATTGGCT ATCCGCAAGC 
CCGACGGCAC TAGTGCCAGG TTTGGTTGAT GATGCGGTGA TTCTGCGAGT GGGGTCAACT 
GAAATCCTGC GTCATCACTA TGGGATGACG GGCGAACTTC AAGCCGCCTT GGTGGTAGTC 
CCGGTCGGTG ATCTGTTGCC ATGGGCAGGC CAAACAATTA CCGTCGATTT TACCGATATT 
TCTGGCCTCG TGTATAGCAC GACCCCGTTA TATTTGGTGT GGACACCCTA A 

 

Protein sequence

MLSSSWLMHW SRRSIWILLF GLLSMGVGFG SKPAPSTAAA LFTATDWRAI RALLPLRQQA 
YFKPSQVSAD DAMGWSIAVS GDTIVVGAPH EDSSTAGVQN GTTPTVDEVA SDAGAAYVFV 
RTGTSWSQQA YLKASQVAAG DGFGTSVAVS GDIIVVGAPH EDSGTVGVQN GATPTIDEAA 
SDAGAAYVFV RTGTSWSQQA YLKASQVSAG DDFGASVAVA DTTVVVGAHQ EDGSTTGVQN 
GATPTVDEAT SDAGAAYVFV RDGRSWSQQA YLKASQVSAG DIFGASVAVA DTTVVVGAHQ 
EDSSTAGVFH SAAPTVDEAA SDAGAVYVFV RDGTSWSQQA YLKASQVSAG DIFGFSVAVA 
GETLVVGAPY EDSSTAGVSN SATPTVDEDM TNAGAVYVFV RDGTSWVQQA YLKASQVSAG 
DIFGFSVAVA GDTIVVGAPH EDSSTSGVSS SATPTVDEAM SDAGAAYVVV RNGTTWVQQT 
YLKAAQTSVS DIFGFSVAVA ADTLVVGVPY EDSSTAGVDH STLPTVDELA SDAGAVYGFT 
NLPTLYLPFV TTSQPLVIAP LTPVAVPTTP VGTPGMIFLT KTITLPTPLS SSGHYWLSAS 
PTALVPGLVD DAVILRVGST EILRHHYGMT GELQAALVVV PVGDLLPWAG QTITVDFTDI 
SGLVYSTTPL YLVWTP