| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_2152 |
|---|
| Symbol | |
|---|
| ID | 5734025 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 2710343 |
|---|
| End bp | 2711413 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641279293 |
|---|
| Product | N-acetylmuramoyl-L-alanine amidase |
|---|
| Protein accession | YP_001544920 |
|---|
| Protein GI | 159898673 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3409] Putative peptidoglycan-binding domain-containing protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000936807 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAC TTTCGCGCCG TACATTTGGC AAACTATCGT TGGGTGTGGC AATGAGCGTG
GTGGTGGGTG GTACTGAATT ACGCCTCTTG CGGCCTGCCT ATGCCGCTGT TGCAACTCCC
GCAATCGATT CAACTACTGC TTGGGGTGCT GCCGCTGCCA AAGAGCCAAT CAATGTGCTC
AATCAAAAGC CAATCGGGAT TGTTGTGCAC CACACGACGA ATCCTAACAC CAACGATTTT
ACCCGTAATA AGGCTTGGCA AGTGGCACGG CAAATTCAGC AAAGCCATTT CAATCGCGGC
TGGATCGATA CAGGCCAACA ATTTACGATC AGCCGTGGTG GCTGGATTAT GGAAGGTCGC
CATCAAAGCT TGAGCATTTT GCAGGGTGGC ACGAAGCATG TTCAAGGCGC ACACGTCGAT
GGCCATAATG AAACCCATAT TGGCATTGAA TGCGAAGGCT TGTATATGAA TGTTACGCCC
AGCCTGCCTT TGTGGAATAA ACTGGTGGCG TTGATTGCCT ATATTTGCCA GCAATATGGC
CTAACCGCCA ACGCTATTGT CGGCCATCGC GATTTGGATA GCACCAGTTG CCCAGGCGAT
ACGCTCTATA GCTTGCTGCC ACAGTTGCGT ACCGCTGTTG ATACGACGCT CAGCGGTGGT
GCAGTTGGCC GGATGTGGCC AATTTTGCGG CGTAACACCC CCGCGACTGG CCTCGCCAAA
ACCATGCAAT ATCTTTTGCG GGCACGCGGC GCGACGATTA CCGCCGATGG AGCCTTTGGC
CCAGGCACCG AAACTGCCGT CAAGAGTTTC CAAACTGCCA ATGGCTTAAC CTCAGATGGA
GTTGTTGGGG CCGCAACGTG GGAAAAATTA ATTATGACCT TGCGCTCAGG CGATACAGGC
GAGGCAGTCA AGGCCTTACA AAATCAACTG ACGGTGCAAA GTTACCCAAC GACAATTGAT
GGCAGCTTTG GCACAGGCGT AAATACCCTT GTTCGCGCCT TCCAAACCAA TCGCCAACTG
ACGGTTGATG GCGTGGTCGG CTTGAACAGC TGGAACAACT TAGCGATGTA G
|
|---|
| Protein sequence | MKKLSRRTFG KLSLGVAMSV VVGGTELRLL RPAYAAVATP AIDSTTAWGA AAAKEPINVL
NQKPIGIVVH HTTNPNTNDF TRNKAWQVAR QIQQSHFNRG WIDTGQQFTI SRGGWIMEGR
HQSLSILQGG TKHVQGAHVD GHNETHIGIE CEGLYMNVTP SLPLWNKLVA LIAYICQQYG
LTANAIVGHR DLDSTSCPGD TLYSLLPQLR TAVDTTLSGG AVGRMWPILR RNTPATGLAK
TMQYLLRARG ATITADGAFG PGTETAVKSF QTANGLTSDG VVGAATWEKL IMTLRSGDTG
EAVKALQNQL TVQSYPTTID GSFGTGVNTL VRAFQTNRQL TVDGVVGLNS WNNLAM
|
|---|
| |