Gene Haur_2143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_2143 
Symbol 
ID5734045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp2699207 
End bp2701474 
Gene Length2268 bp 
Protein Length755 aa 
Translation table11 
GC content47% 
IMG OID641279284 
Productintegral membrane sensor hybrid histidine kinase 
Protein accessionYP_001544911 
Protein GI159898664 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGCCT CAATCCAGCG CTGGCTTAAT ACCATTAAAA TCTCCGACCC TGTGCAACGT 
GAACAAGCTG TCCTCCTTCA AATCATGCTG ATTGGATTAA GCATCATTTG TTTCTTCACA
GTTCCCACTG CATTTATTGT GTCAAGTACT GTTGGCAGTG CATTTCGTGC CAGTCTAACA
AGTATATTGA TTTTAATCTT CTTTGTAATC GCCGTCATGA ATTTGCGTCA AGGCCATTTT
CGGCGCTCAG TTACACTGGC ATCAAGTGGT CTAGTCGTTG GTTTGTCGAT TATTCTTTTA
CTTGAAGGTT TACGCAATAG TGCTTGGATT CTTTCGGCTT TCATGATGCC AATCACGCTA
TCGGGTTTGT TGACTGGCCG CAAGGGTATT AAAACAATTG CTGGTGCCAG TATTATCGTA
ATCGCCATCC TTGGCGGATT ACAGCTATTT AATCTGCAAT TTGTTGGGGC TTATCCGCGC
CTCGGCGATC TTTTGCCACC AACCATTAGC ACGTTTATAT TTAGTGTGTT GATTGTAGGC
TTCTTCTTTC ATCGTTTTAG CGCCTCGTTA AATGATGCCC TCAGCCGCGC TTTGCAACGT
GAATCCGAAC TCCAACAGAT TCGCGATAAA CTTGAAATTC TGGTTGATCA GCGAACCGCA
GCCTTGCAAG ATGCTTTACA CGCGGTCGAA GAGCGTGAAG GTCGGCTCGA AAAAACCAAT
ATCGAGCTAG CCGCCGCCAA AACTGCTGCC GAGGAAGCTA ATCAACTCAA GTCGCGCTTC
TTGGCCAATA TGAGCCACGA GTTGCGCACC CCGCTCAATG CAATTATTAA CTTCACGGCC
TTTCTTGATC GGTATGGTGA GTTCTCTGAG CGCCAACGTG AGCTGCAAGA ACGGGTGCTC
TACAACGCTG ATCATTTGCT TGGTTTGATC AACGACATTC TCGACCTCTC GAAAATTGAG
GCTGGACGCA TGGAGTTGAT GTATGAGAAA ACTCAACTTG AGCCAATCAT CACTGGGGTC
ATGGCGACTG CCAGCGGGCT AACCCGTGAT AAAGGGCTTG AGCTTGAACT CGATATGCCC
GAAGAACTAC CAACGATGGT GATTGATAAA GTGCGGATTC GCCAAGTATT GCTCAATTTG
CTTTCAAACG CCGTCAAATT TACTGAGCAA GGCCAAATTA ATGTGACGAT CAGCCAGCCC
GATCCTGAAA CTGTCCAAAT TTCCGTCCAA GATAGTGGAA TTGGGATCGC TCCTGAGCAT
CAACAACAAA TTTTCGAAGA ATTTCAACAA GTGCAAAATG AAGTTACCCA CCAATATCAA
GGCACTGGTT TAGGCCTGCC AATTAGTAAA TTGTTGGTGG AGATGCACGG CGGCAATATG
TGGCTCGAAA GCACGCCAGG CAAAGGTTCA ACCTTCTTCT TTAGTTTGCC GATTACCAAT
AAATTACCCG AAACGACCAC GATTGATTTA ACTGCCCCAC CAAGTTTGGC CGAACTTGAG
GCAGAACCAA GCAACCCAAC AACCATTGAG ATTGTGGTGA TTGATGATAA TCCTGATGCC
CATGAGACCT TCCGGGTCAT GCTAGAATCA GGAGGGTATC GCGTGCATAG CGTGCTTGAT
AGTCGCTTGG CAATCAGCAC AATCAAACAA ATTGAGCCAC GCTTGATTAT TACCGATGTG
CAAATGCCCA ATCTTGATGG CTGGGAATTG CTGGCCCAGA TCAAGAATGA TCCAACGATT
GCCCATATTC CCATCGTCGT CTGCTCAGTT GTTGATCAAG GGACGATTGG GCTGGTTCTA
GGGGCAAGGA AACATATTGT TAAACCTGTA CGTGAGGAGG TATTGCTGGC TGTTGTTCAA
GAATGTGTCG AACCAACTGC CGAGATCTTG GTCGTTGATG ATAACCCTGA TGCTCGTCAA
GTGATTCAGC ACATCCTCGC AGCACGTGAT TATGCCATCA GTGAGGCCGC CGATGGGATC
GAAGCGATTG CCATGATCGA ACAATCAAAA CCCGATCTGG TCATCCTTGA TCTCATGATG
CCACAAATGG ATGGCTTTGA AGTGCTCGAA AACCTGCGGC ATAGCCCTAA TTATGCCGAT
ATTCCGGTGA TTATTGTCAG CGCCAAGGAT CTTGATCAAC AGGAACATGA TTGGCTGCGC
ACTCGCGCCC AAGGGGTCAT TGCTAAACGC CAACTTAGTG AGGAAGAATT TCTTAGACGC
ATTAATGAGA TCTTTAACCA AGGAGTAGAG TATGCCCGTG GCAAGTAA
 
Protein sequence
MQASIQRWLN TIKISDPVQR EQAVLLQIML IGLSIICFFT VPTAFIVSST VGSAFRASLT 
SILILIFFVI AVMNLRQGHF RRSVTLASSG LVVGLSIILL LEGLRNSAWI LSAFMMPITL
SGLLTGRKGI KTIAGASIIV IAILGGLQLF NLQFVGAYPR LGDLLPPTIS TFIFSVLIVG
FFFHRFSASL NDALSRALQR ESELQQIRDK LEILVDQRTA ALQDALHAVE EREGRLEKTN
IELAAAKTAA EEANQLKSRF LANMSHELRT PLNAIINFTA FLDRYGEFSE RQRELQERVL
YNADHLLGLI NDILDLSKIE AGRMELMYEK TQLEPIITGV MATASGLTRD KGLELELDMP
EELPTMVIDK VRIRQVLLNL LSNAVKFTEQ GQINVTISQP DPETVQISVQ DSGIGIAPEH
QQQIFEEFQQ VQNEVTHQYQ GTGLGLPISK LLVEMHGGNM WLESTPGKGS TFFFSLPITN
KLPETTTIDL TAPPSLAELE AEPSNPTTIE IVVIDDNPDA HETFRVMLES GGYRVHSVLD
SRLAISTIKQ IEPRLIITDV QMPNLDGWEL LAQIKNDPTI AHIPIVVCSV VDQGTIGLVL
GARKHIVKPV REEVLLAVVQ ECVEPTAEIL VVDDNPDARQ VIQHILAARD YAISEAADGI
EAIAMIEQSK PDLVILDLMM PQMDGFEVLE NLRHSPNYAD IPVIIVSAKD LDQQEHDWLR
TRAQGVIAKR QLSEEEFLRR INEIFNQGVE YARGK