| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_2087 |
|---|
| Symbol | |
|---|
| ID | 5733975 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 2598983 |
|---|
| End bp | 2600722 |
|---|
| Gene Length | 1740 bp |
|---|
| Protein Length | 579 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641279228 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001544855 |
|---|
| Protein GI | 159898608 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTTTC CGCTAGCGCG TTATCGTCGT TTACTGGCAA CCTATCTCAA GCCACAGCGT
GGGCGGGTGC TCGGCTTAGG ATGCTTGGTT TTTCTGGGCA TTGGCTTGCA ATTGCTTAAT
CCGCAAATTA TGCGCCGATT TTTAGATTCG GCGCTCGCTG CTCAACCTTT GGAGCAACTG
ACCAAACTGG CATTACTCTT TATGGGTATC GCCTTTGGAC AACAACTTTT AGCGCTCGGT
GCGGTTTATC TGAGCGAGCA AATTGGCTGG ACCGCAACGA ATGCCTTACG TGCCGATTTG
ACCGCCCATT GTCTGCACTT GGATAGTAGT TTTCACAATC ACAAAACACC AGGCGAGCTA
ATCGAGCGCA TCGACGGCGA TGTTACGACC TTAGCCAACT TTTTTACCCA GTTTATTATT
CAATTGCTGG GCAATGGCTT GTTGCTGCTG GGGATTATTG TGGCCTTGGC CTTGGAAGAT
TGGCGGGTTG CAGTTGGGCT AATCGTCTGT GTGGCAGCGG CGATCAGCCT GTTGCAAAAA
ATGCAACGGG TTGGCGTACC ACTCTGGGGC GAATCACGCC AAGCGAGTGC TGAGCTGTTT
GGCTTTTTAG AAGAACGCTT GGCGGCAACC GAAGATATTC GCTCAAGCGG CGCACGCAAT
TATGTGATGC AACAGCTCTA TCGCCAAATG CTCGTGCTCT ATCGCAAAAC TCGTAAAGCT
GAGCTAGCCA CCGCTTGGCT CTATAACGCT GGCCAATCGA TGTTTATTAT CGCCAGTGGT
TTGGGTTTGG GCATTGGTAT CTACCTGTAT CAACAGCAAC AAACGACAAT TGGTGGCGTG
TATATCATCA CAGCCTATAT TGGCTTGCTC ACCACGCCGC TCGAGCAAAT TTTACGCCAA
ATTCAGGAGT TTCAAAAAGC CAGTGCCGGC ATTTTGCGCA TCGATGAATT GCGCCAGCAG
CGACCAGCAA TCGTTGATGG CACTGGCCCG ACAATCCCGC AACAAGCACT TGATCTGCGG
TTTGAGCAAG TTTCATTTGG CTATAACACC GATACGCCAG TCTTGCGAGC GCTTTCGTTT
GAATTACCCG CCCACCAGAT TTTAGGCGTA TTGGGACGGA CTGGTAGCGG CAAAACGAGC
CTGATTCGGC TTTTGTTACG CTTGTATGAT CCGCATCAAG GTACAATTCG CTTAGGCGGC
ATCGATATTC GCAACACCAG TTTAGCCGAT TTGCGCCGCT CGATTGGCTT CGTGAGCCAA
GATGTGCAAC TATTTCATGC CAGCGTTCGC GATAACCTGA GCTTTTTCGA TCACAGAATT
GCTGATCAGC AATTGCTGGC TGCCTTAGAA ACCCTCGGCC TCACCAACTG GCTTAACAGC
CTTGAACATG GCCTCGATAC GCTGATCAAG CCAAATGGGC TTTCGGCGGG TCAGGCTCAG
CTCTTGGCAT TTGCGCGAAT TTTGCTAAAA GACCCACGAT TAATTATCCT CGATGAGGCT
TCATCACGGC TTGACCCAGC GAGTGAGGCG ATTGTCGAAC GCGCCTTAGA TCGGCTGTTG
GCAGGTCGCA CCGCAATTAT CATTGCCCAT CGGTTGGCAA CCTTACAACG CGCCGATGCG
ATTTTAGTGC TCGATGCTGG CACAATTCGT GAGTTTGGCC CACGCCAAGC ACTGTTACAA
AACCCTCAAT CGCAGTATAG CCAACTGTTG CAACATGGCA TAACCGAGGT GTTCGCATGA
|
|---|
| Protein sequence | MQFPLARYRR LLATYLKPQR GRVLGLGCLV FLGIGLQLLN PQIMRRFLDS ALAAQPLEQL
TKLALLFMGI AFGQQLLALG AVYLSEQIGW TATNALRADL TAHCLHLDSS FHNHKTPGEL
IERIDGDVTT LANFFTQFII QLLGNGLLLL GIIVALALED WRVAVGLIVC VAAAISLLQK
MQRVGVPLWG ESRQASAELF GFLEERLAAT EDIRSSGARN YVMQQLYRQM LVLYRKTRKA
ELATAWLYNA GQSMFIIASG LGLGIGIYLY QQQQTTIGGV YIITAYIGLL TTPLEQILRQ
IQEFQKASAG ILRIDELRQQ RPAIVDGTGP TIPQQALDLR FEQVSFGYNT DTPVLRALSF
ELPAHQILGV LGRTGSGKTS LIRLLLRLYD PHQGTIRLGG IDIRNTSLAD LRRSIGFVSQ
DVQLFHASVR DNLSFFDHRI ADQQLLAALE TLGLTNWLNS LEHGLDTLIK PNGLSAGQAQ
LLAFARILLK DPRLIILDEA SSRLDPASEA IVERALDRLL AGRTAIIIAH RLATLQRADA
ILVLDAGTIR EFGPRQALLQ NPQSQYSQLL QHGITEVFA
|
|---|
| |