| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_2079 |
|---|
| Symbol | |
|---|
| ID | 5733967 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 2588427 |
|---|
| End bp | 2590640 |
|---|
| Gene Length | 2214 bp |
|---|
| Protein Length | 737 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641279220 |
|---|
| Product | peptidase C14, caspase catalytic subunit P20 |
|---|
| Protein accession | YP_001544847 |
|---|
| Protein GI | 159898600 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTGGCGC AGCTGATTCT CAAGCATCAT CTCACCGTGT CCTATTTTCC CGAAGAAAGC
TATCCGGCGA TGAAGGGGGA ATTTGCGCGG ATTCTTGATG AACTCTCGAA ACAGGGGATT
CACGAGACCA TCTATCTGGA TGGCCTCGAT CAACTCCAGC CAGAAATTGA CGGCTCGCGG
GATTTATCAT TCTTGCCACC ACAGCCGCCC CAAGGCATGG TGATCGTGCT TGGCTCACGG
CCTGATGAGA CCTTGAAACC GCTGGAGATT CTGCATCGGG TCGATTACGA TCTGCCACCA
CTGAGTGAAA CCGATGCACT GTCGCTCTGG CGATCGGTCC AGCCTGGCAT GGCAGATGGC
CTATTCCATG ACCTGTATAC GGCGCTGAAG GGCAATGCAT TATTTGTCCA TTTAGCGGCG
GATACGATGC AGGATGCGTC GGTGGTCGAT GCGACCAGTC TCATCAAACA GATTGAGCAG
AATCCACAAA ATTTGTTTGG GATTACGCTG GAACGGATTA AACGCGTGCC CCTCTCCAAG
TGGGATACGG TGTGGAAGCC CATGCTGGCG CTCTTGCTCG TCGCCCAAGA ACCATTGCGA
CTGGATGTGT TGGGCGATCT GCTGGGACAT GACCACGACA CCATGCAGGA TGCAGTGTTG
GTTTTAGGTG GGTTGGTCAG CCAAGGTATT GATCACCAGG TTGCCTTACA TCACCTGCTG
TTTCGTGACT ATTTGGCGGC ATCGGTGTTC AATGATCGTG ACGTCAAACG CTGGCATCAA
GAGTTGTCCA ACTGGTGTGC GAAGGATGTG GATGCGATTT GGTCCGATGA TCGCGATCCC
ATTGAGCAGG CACGGCGGGT CTATGCGCGA CATCATTACA TCACCCATCT CTCAGGGGCA
GAGAACTGGC CTACACTCTG GCAGGTCTTG GATGCGGGCG ATTATGGGGA ACAGAAAACC
CGATTTGATC CGAGTACCCG GCTCTATGCC TTGGATTTGG ATCGCGGGCG AGAGAGTGTG
ATTAAGGCAG GTCAATCAAC CGAGGAACAT ATCCAAAATT TGCCCCGCCT GTGGAAGTAT
AGTTTGCTGC GGACGAGCTT AACCAGCCGT GTTGATCAGT GGCCAGATAA TGCGTTTGAG
GTTTTGGTGA TCCTTGGGCG TACACAAGAA GCTCTAGAGC GTATTCAATT GCTTTCTGAT
CCAGAACAGC AGATCACTCT TTGGTGTAAA ATGTTGGCTC AGTGTGATAC AAAAAACTAT
AACATAATAT TAAACCGAAT ACAACAATCA GTCAGCCAAC TTTCACGTCA TCATACTGAT
ACCCTCGCAA CAATTGCCGA AACTACCGCT ACCAGTGGGA ATATCGACCG TGCACTCTCC
ATTACTGCCG CCATTGAAAA TAATGATCGC ACAGGAATCC TTAAAAAAAT TGCCAGAACC
GCCGCTACTA GTGGAGATAT CGACCGTGCA CTCTCCATTG CTGCCACCAT TGAAAATGAT
AATTCCCGTA GCTATGCTCT CACAGCAATT GCCGAAGCCA TCGCCACCAG TGGGAATATC
GACCGTGCAC TCTCCATCGC TGCCACCATT GAAAATGATA ATTCCCGTAG CTATGCTCTC
AAAAAAATTG CCGAAACTAT CGCTACCAGC GGGGATATCG ACCGTGCACT CTCCATTGCT
GCCACCATTG AAAATGATAA TTCCCGTAGC TATGCTCTCA CAGCAATTGC CGAAGCCATC
GCCACCAGTG GGAATATCGA CCGTGCACTC TCCATCGCTG CCACCATTGA AAATGATAAT
TCCCGTAGCT ATGCTCTCAA AAAAATTGCC GAAGCCATCG CTACCAGTGG GGATATCGAC
CGTGCGCTCT CCATTGCTGC CACTATTGAA AATAATGATC GCACAGGAAT CCTCGCAACA
ATTGCCGAAA CCGCCGTTGC CAGTGGAGAT ATCGACCGTG CACTCTCCAT TGCCGCCACG
ATCCCTGATG ATCGAATGCG AATCAATACT TTTATAACTA TGGCCCCAGT GATTCAGTCA
GCTGAAAAAA TTCTCTCGAT TATCCATAAG GAATGGTTTC AGAGTAAAAC TCATGATATG
ACTTTGTATT CATTTTGTCT TATAAATCTC TTATCAGAAA ATAATCTTTG GCTAATTACA
ACAATTATAA AAAGTCAGGG GTGGGTCAAT GACCAGTTGA AACGGCTGGG GTAG
|
|---|
| Protein sequence | MVAQLILKHH LTVSYFPEES YPAMKGEFAR ILDELSKQGI HETIYLDGLD QLQPEIDGSR
DLSFLPPQPP QGMVIVLGSR PDETLKPLEI LHRVDYDLPP LSETDALSLW RSVQPGMADG
LFHDLYTALK GNALFVHLAA DTMQDASVVD ATSLIKQIEQ NPQNLFGITL ERIKRVPLSK
WDTVWKPMLA LLLVAQEPLR LDVLGDLLGH DHDTMQDAVL VLGGLVSQGI DHQVALHHLL
FRDYLAASVF NDRDVKRWHQ ELSNWCAKDV DAIWSDDRDP IEQARRVYAR HHYITHLSGA
ENWPTLWQVL DAGDYGEQKT RFDPSTRLYA LDLDRGRESV IKAGQSTEEH IQNLPRLWKY
SLLRTSLTSR VDQWPDNAFE VLVILGRTQE ALERIQLLSD PEQQITLWCK MLAQCDTKNY
NIILNRIQQS VSQLSRHHTD TLATIAETTA TSGNIDRALS ITAAIENNDR TGILKKIART
AATSGDIDRA LSIAATIEND NSRSYALTAI AEAIATSGNI DRALSIAATI ENDNSRSYAL
KKIAETIATS GDIDRALSIA ATIENDNSRS YALTAIAEAI ATSGNIDRAL SIAATIENDN
SRSYALKKIA EAIATSGDID RALSIAATIE NNDRTGILAT IAETAVASGD IDRALSIAAT
IPDDRMRINT FITMAPVIQS AEKILSIIHK EWFQSKTHDM TLYSFCLINL LSENNLWLIT
TIIKSQGWVN DQLKRLG
|
|---|
| |