| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1963 |
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| Symbol | |
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| ID | 5733852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 2398939 |
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| End bp | 2400993 |
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| Gene Length | 2055 bp |
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| Protein Length | 684 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641279107 |
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| Product | sodium/hydrogen exchanger |
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| Protein accession | YP_001544734 |
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| Protein GI | 159898487 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0569] K+ transport systems, NAD-binding component
[COG4651] Kef-type K+ transport system, predicted NAD-binding component |
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| TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000770592 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCATG ATATATCGTT GATCACCAAT ATTTCGGTCG CGTTGGTCGT GGCTTTCGCT
GGCGGTTTGC TGGCTCGCCG CTTAGGTCTA CCCACAATTG TCGGCTATCT TTTAGCGGGA
ATGCTGATCG GGCCATTTAC GCCTGGCTTC GTCGGCGATA TTGGCGATAT TAGCCAGCTT
GCAGAAATTG GCGTAATCTT CCTCATGTTT GGGGTTGGTT TACACTTCTC GCTCAAGGAT
CTTTGGTCGG TGCGCAAGGT GGCGATTCCA GGAGCAGCCC TGCAAATGCT CTTGGCGACT
GGCTTGGGCT TTGGGCTAAC TCGTTTGTGG GGTTGGACAA CCGCCGCAGG TTTGGTCGTC
GGCTTGGCGA TTTCAATTGC GAGTACAGTG GTGTTGCTGC GTGGCTTGAT GGATGCAGGC
CAACTCAATA CGCCCGCTGG CCAAACCGCA GTTGGCTGGT TGGTGCTTGA AGATTTAGCC
ACCGTGCTGA TTTTGGTCTT GTTACCAGCC TTGTTCGGCA GCGAGGGCGG TAATCCGTGG
GTGACAGGCG GCTTGGCCTT GCTCAAAACC ACCGCCTTTG TATTGATTAT TCTGTTCGTT
GGCGGGCGTT TCTTGCCATG GCTACTGACC TCGATTGCCC ATTCACGTTC GCGCGAACTG
TTTATTTTGG CAGCCGTAGC CGTCGCGCTT GGCACAGCCT TTGCCGCAAC CGCCGCCTTT
GGCGTTTCAT TAGCACTAGG CGCGTTCTTA GCTGGCGTAG TGCTGGGCGA ATCGGAAATT
AGCCATCAAG TTGGCGATGA AGTGCTGCCC TTCCGCGAAA TCTTTGCGGT GATCTTCTTT
GTTTCAGTGG GTATGTTGGT CAACCCGCAA TACCTGTGGG ATCACATCGG CCAAGTCGTG
GCCTTAACCG CGTTGATCGT CATTGGCAAG GCTATTTTCA CGCTCTTTTT GGGCTTGATT
CTGCCTTCAA CTGGCCGCAC GATGATTGTG GTCGCCGCTG GCCTCAGCCA AATTGGTGAA
TTCTCGTTTA TCGTTGGGCA GGCTGGGGTT GGTTTGGGGG TATTGACCCA AGATCAATAT
TCGCTGGTGT TGGCGGGAGC AATGTTCTCG ATTATGCTCA ATCCAGTGAT GTTTTGGTCG
ATTCCGCATG TTGAAACATG GCTCAAGCGT TATCCAAAAC TATGGGCACG TTTTGAGCGC
CACGCCACGA CTGAGCCGCA ACCAACCACA TTGCCTCAGG CCGAACATGT CGTCGTCGTC
GGCTATGGGC GGGTTGGCGA GCACATTGGC ACAGTCTTAA ATCGGCTGCA AATTCCCTTT
TTGGTGGTCG AAGCCGACAA TCATCGCGCT GACGATTTTA TGACCAAGCA TATTCCAACG
TTGATCGGCG ATGCAGCCAA CTCCGATGTG CTCACCCACG CCAAACTTGA GCAAGCCAAA
GCCTTGGTGG TGACCTTGCC CAACGAGGCG GCTAGTGAGT TAGTCGTGGC GGCTGCCCGC
GATCTCGCAC CAAATTTGCC GATTATTGCA CGGGCGGCAA CCAATTCAGG GGTACAACGG
CTCGCCGATT TGGGCGCACA AGATGTGATT CATCCAGAAT TAGAGGGTGG TTTGGAAATT
ATTCGGCATA CCTTGTTGCG CTTGGGCTAT CCTGCAACTC AAGTTCAAGG CTATACCGAT
GCCGTCCGAC GTGATCAATA TCACACAGAT ATCACGCCGA CTGAGCATCT CATCCTTGAA
CAACTGATTC AAAGCGTGCG CGGCTTTGAG ATTGCTTGGC GTGGCATTGC CGCCAGCAGC
ACCATGATTG GCCAAAGCTT GGCCGCCCTC AACTTCCGTG CTCAAACTGG TGCTTCCGTG
ATCGCAGTCA TTCGCGATCA GCAATTGATT AGCAACCCTG AATCGCAATT GACCCTCGCG
CCAGGTGATT TACTCGGCTT GATTGGCGAT GAAAGCCAAA TTAATGCCGC CGATAGCCTG
ATCAGTCGCA GCCAAGCGAG CGAGCAGAGC ACCAACCAAC CATCCGCTGC AACCTTCGCC
CCCAGCGGAG CCTAA
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| Protein sequence | MPHDISLITN ISVALVVAFA GGLLARRLGL PTIVGYLLAG MLIGPFTPGF VGDIGDISQL
AEIGVIFLMF GVGLHFSLKD LWSVRKVAIP GAALQMLLAT GLGFGLTRLW GWTTAAGLVV
GLAISIASTV VLLRGLMDAG QLNTPAGQTA VGWLVLEDLA TVLILVLLPA LFGSEGGNPW
VTGGLALLKT TAFVLIILFV GGRFLPWLLT SIAHSRSREL FILAAVAVAL GTAFAATAAF
GVSLALGAFL AGVVLGESEI SHQVGDEVLP FREIFAVIFF VSVGMLVNPQ YLWDHIGQVV
ALTALIVIGK AIFTLFLGLI LPSTGRTMIV VAAGLSQIGE FSFIVGQAGV GLGVLTQDQY
SLVLAGAMFS IMLNPVMFWS IPHVETWLKR YPKLWARFER HATTEPQPTT LPQAEHVVVV
GYGRVGEHIG TVLNRLQIPF LVVEADNHRA DDFMTKHIPT LIGDAANSDV LTHAKLEQAK
ALVVTLPNEA ASELVVAAAR DLAPNLPIIA RAATNSGVQR LADLGAQDVI HPELEGGLEI
IRHTLLRLGY PATQVQGYTD AVRRDQYHTD ITPTEHLILE QLIQSVRGFE IAWRGIAASS
TMIGQSLAAL NFRAQTGASV IAVIRDQQLI SNPESQLTLA PGDLLGLIGD ESQINAADSL
ISRSQASEQS TNQPSAATFA PSGA
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