Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_1894 |
Symbol | |
ID | 5733783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 2282948 |
End bp | 2283982 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641279038 |
Product | anti-sigma-factor antagonist |
Protein accession | YP_001544665 |
Protein GI | 159898418 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCAAC CCACAGAGCA AGCGCTGGTC ACCAAACGCC TGAAAACCAC GGTTTACTGG CTACTCGGCG GTTCATTGAT TTCGATGTTT TTGTATATGG TGTTGGGCGA TTGGATCGCC GTCGGCAGCT TTGCAGTTAC CAGTGGGTTG TTAGGCACGG CTTATTGGCT CATCCTGCGC CAGCATAATC AATCGGCGGT AGTTTTGATG AACATGGCCG CACTATGTTT GGTGATTGTT GGATCATTTC GCTTTTTCAC CTTGCTCTCG ATCGCTACGG TTACAATTAT TTCGATTGTG CTGGTGCTGC CGTTTGTCGA TAGCCGACGA CTGCTCGGCA TTTGTGGACT TGCATGGGTT GTTAGTATTA TCAGCATCGC CAATCGGCTG CGGATCGATC AATTTCCATG GGCCGAGATG CCAATTCGCG TTTCACTCAA CTCGGTCTCG ATTTTGGTGG TGATGGGCCT GCTCTGGCAA ATTCATCGTC AACTAACCAA TAGTCTGCAA GCCAGCGAAC GCTCGAACCA AGCCTTACGC GCTAGCCAAC AATCGCTCGA ACAGCAGGTT GAACAGCGCA CCGCCGCCCT GCAAAAAGCC CTACAAGAAG TGCAAGCCCA AGCCGACAGC CAAGCAGTAT TGGCTCAACA ACTAGCCGAG CAACAAACCA CCATACGCAG CCTGAGTGTA CCAATTTTGC CAATAACCCA GCATAGTTTG GTTGTGCCAT TAATTGGCGA TTTGGATGCT GAACGCTTGG GCACATTGGT AGAACAAATT CTAACCAACC TCAAAAGTCA ACGCACCCGC CATTTAATTC TTGATGTTAC TGGTGTACCA ACTTTAGATC GCGATGCTGG CCACAGTTTG CTCAAAGTTA GCAACGCTGC TCGCTTGTTG GGAGCCAAAA CCACCTTAAT TGGCGTGCGG CCTGATGTGG CCGAAATGCT CGTGAGCATT GGGCTTGATT TGCGCTCGAT TGGCAGCGAA AAAGATTTAC AAAGTGTGGT GTATGGCCTC GTTCGCCATG CCTAA
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Protein sequence | MSQPTEQALV TKRLKTTVYW LLGGSLISMF LYMVLGDWIA VGSFAVTSGL LGTAYWLILR QHNQSAVVLM NMAALCLVIV GSFRFFTLLS IATVTIISIV LVLPFVDSRR LLGICGLAWV VSIISIANRL RIDQFPWAEM PIRVSLNSVS ILVVMGLLWQ IHRQLTNSLQ ASERSNQALR ASQQSLEQQV EQRTAALQKA LQEVQAQADS QAVLAQQLAE QQTTIRSLSV PILPITQHSL VVPLIGDLDA ERLGTLVEQI LTNLKSQRTR HLILDVTGVP TLDRDAGHSL LKVSNAARLL GAKTTLIGVR PDVAEMLVSI GLDLRSIGSE KDLQSVVYGL VRHA
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