Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_1830 |
Symbol | |
ID | 5733718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 2126986 |
End bp | 2128776 |
Gene Length | 1791 bp |
Protein Length | 596 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641278973 |
Product | ABC transporter related |
Protein accession | YP_001544601 |
Protein GI | 159898354 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGATGA CCAATCAATC TCTTGCCGCC CGCCGTTCAT CTGCCGCAGC CAAATCAACT GCTCAAAATC CCATGCGCCT TTTATTAACC TTATATCGTG AGGATTGGGG TAAATTAGCG CTGGCTAGCC TGATCTATAT TGTTAAACAT AGTCCAGTTT GGATTATGCC GCTAATTACT GCCGATATTA TTAATATTAT TGCCAGTCAA GGCCAAATCG GGCTTGGGCG TTTATGGTTT GATGGATTTT TGTTGTTAAT TGTGTTATTG CAGAATATTC CAACTCAGTA TGTTTATATT CGCTTGCTAA GCCGCGCAAT TCGCCGTATG GAAAGCAAAT TGCGTTCGAT GTTAGCGCAG CAGCTTCAAT TAATTTCAAT TGGTTTTTAC AATCAACGTA GTAGCGGCGT GTTGCAGGCC AAGGTACTGC GCGATGTTGA AATTATCGAG CAATTAACCC GCAATGTGTT TCAGAGTTTC CCTGCGGCAA TTTTAAATTT GCTGGCAGCA ATTATTGTGG TGGCCTTTCG TTCACCATGG TTTTTAGTCT TTTTTGTGGC AACTGTGCCG CTCGCAGCAA TTGTGTTGCG TACCACTCGT AATCCCATTC AATCGAGCAA TAGCGCCTTT CGTCATCAAG TTGAGCGTTT GGCAGCACGC TTGAGCGAAA TGATCCAACT GATTCCGATT ACTCGTGCTC ATGCCGCCGA AGAAGAAGAA ATGCGCAAAC TTGATCGGCG CTTGGTGCAA TTTCAACATG CTGGGTTGCG CCTCGATGCG GTCAATTCAC TATTTGGGGC GGCTTCATGG GTCAGCTTCA ATCTGTTCAA TGGCTTGTGT TTAGTCGTTG CTGCTTGGGC TTGCTACACC CAATTTTTGC CCTTGGCTGT GGGCGATGTG GTTTTGATGA CCAGCTATTT CTCAATTTTG ACTGGCGCAG TGATGGAATT AGCCAACCTT GCACCCCAAA TTAGCAAAGG CTTGGAATCG GTCCAGTCGG TCAGCGAAAT TCTGGATAAC GATGATATTG AGGATAACGA AGGCAAACAA CGCCTCAATC AAGTTGCTGG GCATTTTCAA TTTAATAATG TGCATTTCAG CTACCCTGAT ACCCAACGTT CATCGCTCTA CGACCTGACG TTGGAAGTGC AGCCAGGCGA AACAATTGCC TTCGTCGGCC CATCGGGTTC GGGTAAATCG ACCTTGCTTA ATTTGGTAAT TGGCTTTTTG CAACCCAGCG CTGGCAACAT TTTGCTTGAT GGTCATGATC TACAAACGCT TGATTTGCGC AGCTATCGCC GCCATATCTC GGTTGTTTCG CAAGAAACCT TGCTCTTCGA TGGTTCGGTG CGCGACAATA TTTGTTATGG TTTGAATGAT GTGAGCGAAG CGACGATTGA GCAAGCCTTG CGCGATGCCA ATGCCTTGGA GTTTGTGCTC GACATGCCCG ATGGCCTCGA TACGATCATT GGCGAACGTG GCACGCGGCT TTCGGGTGGC CAACGCCAGC GCTTAGCAAT TGCGCGAGCC TTGATTCGCA ACCCACGGGT TTTGATTTTG GATGAAGCAA CGTCGGCGCT CGATAGCATC TCGGAAGGCT TAATTCAAGA GGCCTTAGAA CGCTTGATGC AAGGCCGTAC TACCTTTGTG GTTGCTCACC GCCTTTCGAC CGTGCGCAAC GCTGATCGGA TTGTGGTAAT TGAGCATGGC CAAATTGTTG AGGTTGGTAG TCATCAAACC TTAATTGCCC AACACGGAGC CTACGCCCAG TTGCAAGCCT TGCAAGCCTA A
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Protein sequence | MPMTNQSLAA RRSSAAAKST AQNPMRLLLT LYREDWGKLA LASLIYIVKH SPVWIMPLIT ADIINIIASQ GQIGLGRLWF DGFLLLIVLL QNIPTQYVYI RLLSRAIRRM ESKLRSMLAQ QLQLISIGFY NQRSSGVLQA KVLRDVEIIE QLTRNVFQSF PAAILNLLAA IIVVAFRSPW FLVFFVATVP LAAIVLRTTR NPIQSSNSAF RHQVERLAAR LSEMIQLIPI TRAHAAEEEE MRKLDRRLVQ FQHAGLRLDA VNSLFGAASW VSFNLFNGLC LVVAAWACYT QFLPLAVGDV VLMTSYFSIL TGAVMELANL APQISKGLES VQSVSEILDN DDIEDNEGKQ RLNQVAGHFQ FNNVHFSYPD TQRSSLYDLT LEVQPGETIA FVGPSGSGKS TLLNLVIGFL QPSAGNILLD GHDLQTLDLR SYRRHISVVS QETLLFDGSV RDNICYGLND VSEATIEQAL RDANALEFVL DMPDGLDTII GERGTRLSGG QRQRLAIARA LIRNPRVLIL DEATSALDSI SEGLIQEALE RLMQGRTTFV VAHRLSTVRN ADRIVVIEHG QIVEVGSHQT LIAQHGAYAQ LQALQA
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