Gene Haur_1807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1807 
Symbol 
ID5733709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp2100393 
End bp2101403 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content55% 
IMG OID641278950 
Producttransport system permease protein 
Protein accessionYP_001544578 
Protein GI159898331 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.0834766 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTACAA CTTTGCTCTC GCGACGCATG CTGATTGGAG TGCTGGCAGC CTTTGGCTTG 
CTGGCAATTG TTATTTTATT GAGCCTTGGG GTTGGCTCGG ATAATGCAAT TGGCTTGGCC 
CAAGTCTTTG CTGTGCTCCA AGGCGCTGGT GATGATCAAG CCCGTTTGAC CGTGCTCGAT 
TTGCGCGTAC CACGCACGAT TATTGGCGTT TTGGTCGGCG TGGCGCTTGG CTCGGCTGGT 
GCATTATTGC AGGCGGCTGC CCGTAATCCT TTGGCTGAAC CAGGTTTGTT GGGAGTAAGC 
GCAGGCTCGG CAACAGCTGT GGTCGTATCG ATTGCGCTTG GAGCCAGCTT GAATAATTTA 
CAAGTTGGCG TTGCCATTTT TGGGGCGTTG ATTGGCTGTA GCGTCGCGCT CGGCGTTGCC 
CGCATGAGTG GCCTCGGTGA TGATCCAATT CGCTTAGTGC TGGCGGGAGC AGCCTTGAGC 
AGCATGCTGG CGGCGGTTTC CTCAGTAATT CTGTTGACCG ATCAACGCAC CGCTGATGAA 
GTGCGCTTTT GGACGATTGG CGCAATTGCT GGCCGTAATT TAAGCAGCAT CACTTCGGCA 
ATTCCCGTAT TATTGCTGGG TTTGGCGGTT GCCTTGCTGC TAGCACGGCC ATTAGCGGCC 
TTGGCACTGG GCGAAAAAGT TGCCAGTGGG CTGGGTCAAC GTCCCAAATT AGTCCGAACA 
GGCGTGATGA TCAGCGTCGC CTTATTGGTT GGTTCGGCCA CGGCGATGGC TGGGCCGATT 
GGCTTTGTTG GGCTAGTGGT GCCGATTGCG GCTCGTGCGA TGGTTGGGCC AGATATTCGG 
CGAGCGTTAA TATTGGCGGT GCTGCTTGGC CCAAGTTTTG TGCTGTTGGC CGATGTGCTT 
TCGCGGATTG TTGCGCGACC AACCGAAACC CCGCTGGGTG TGATTTCAGC ATTAATTGGT 
GCGCCAATTT TGGTGCTGAT TGTGCGCAGC CAACGCTTAC CAGCGCTCTA G
 
Protein sequence
MATTLLSRRM LIGVLAAFGL LAIVILLSLG VGSDNAIGLA QVFAVLQGAG DDQARLTVLD 
LRVPRTIIGV LVGVALGSAG ALLQAAARNP LAEPGLLGVS AGSATAVVVS IALGASLNNL 
QVGVAIFGAL IGCSVALGVA RMSGLGDDPI RLVLAGAALS SMLAAVSSVI LLTDQRTADE 
VRFWTIGAIA GRNLSSITSA IPVLLLGLAV ALLLARPLAA LALGEKVASG LGQRPKLVRT 
GVMISVALLV GSATAMAGPI GFVGLVVPIA ARAMVGPDIR RALILAVLLG PSFVLLADVL 
SRIVARPTET PLGVISALIG APILVLIVRS QRLPAL