| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1733 |
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| Symbol | sdhA |
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| ID | 5733620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 2017974 |
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| End bp | 2019887 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641278875 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_001544504 |
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| Protein GI | 159898257 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01811] succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATTGA ACGCTAAAAT TCCAGCAGGG CCGCTGGAAG ATAAATGGGA TCAGCACCGC
TTCAATGTGA AGTTGGTTAA CCCCGCCAAT AAGCGCAAAT ACACCGTTTT GGTGGTTGGC
TCGGGCTTGG CAGGCGCTTC TGCTGCTGCT TCATTGGCTG AGCTTGGCTA TAACGTGAAG
TGTTTCTGCT TCCAAGATAG CCCCCGTCGC GCCCACAGTA TCGCGGCGCA AGGTGGCATC
AACGCTGCCA AGAATTATCA AAACGACGGT GATAGTGTTC GCCGTTTGTT CTACGATACG
ATCAAAGGTG GCGATTATCG GGCACGTGAA GGTAATGTGT ATCGGTTGGC GCAAGTCAGC
GTTAACATTA TTGACCAATG TGTGGCCCAA GGTGTGCCGT TCGCCCGCGA GTATGGCGGC
GTAATGGCTA ACCGTTCGTT TGGTGGCGCA CAAGTTTCGC GCACGTTCTA TGCCCGTGGT
CAAACTGGCC AACAATTGTT GATCGGCGCA TATTCAGCGC TCGAACGCCA AATTGGCTTG
AAAAAAGTCG CCATGTATTC ACGTTGCGAA ATGTTGGATA TTGTTTTGGT CGATGGCAAA
GCCCGTGGGA TTATCACCCG CGATTTGATC AACGGCAAGA TCGAACGTCA CGCAGGCGAT
GCAGTGGTTT TGGCAACAGG CGGTTATGGC AACGTCTTCT ACCTTTCAAC CAATGCTAAA
GGTTGTAACG TTACTGCCAG CTATCGCGCC TACAAACGTG GTGCAGCCTT CGCCAACCCC
TGCTTTACCC AAATTCACCC AACCTGTATC CCGGTTGCTG GCGATCACCA ATCAAAATTA
ACCTTGATGA GTGAATCGTT GCGTAACGAC GGACGGATTT GGGTTCCCAA GAAAGCTGGC
GATAATCGCG CCGCCAAGGA TATACCCGAA AGCGAACGCG ATTATTATCT CGAACGCAAA
TATCCTTCGT TCGGCAACCT CTCGCCACGC GATATTTCTT CACGCGCAGC CAAAGAGGTG
TGTGATGAAG GCCGTGGCGT AGGCCCAGGC GGCTTGGGTG TCTATCTCGA CTTCAGCGAT
TCGATCAAGC GCTTAGGCAA AAATATGATT GCCGAACGTT ATGGCAACTT GTTCGAGATG
TACGAACGCA TCACTGGCGA AAATCCTTAC GAAGTGCCAA TGCGGATTTA TCCCGCCGTG
CACTATACCA TGGGCGGCTT GTGGGTTGAT TACAACTTGA TGAGCAATGT TGAAGGCTTG
CACGTTTTGG GCGAAGCCAA CTTCTCCGAC CACGGAGCCA ACCGACTTGG GGCCAGTGCC
TTGATGCAAG GTTTGGCCGA TGGCTACTTC ATTCTGCCCT ACACAATTGG CGATTACATT
GCTAGCGCCA AATTAGCCCC AGTTAGCACC GATCACCCAG CTTTTGCCGA AACCGAGCGC
GAAGTAACCA CACGGCTCAA GCAATTGCTC GAAATCAATG GCAAGCGCAG TGTTGATGAT
TTCCATCGCG AGCTTGGCAA AGTGATGTGG GATTACTGTG GCATGGCGCG GAATGATGCT
GGGTTGCGCA CCGCCTTAGA GCGCATTCCC CAGATCCGCG AAGAATTCTG GCGCGATTTG
CGCGTGCCAG GCAGCGGCGA ATACTTCAAC CAAGAGTTGG AAAAAGCCGG ACGTGTGGCC
GACTTCCTCG AATTTGCTGA ATTGATGTGC CACGATGCGC TGATGCGCAC CGAATCGTGT
GGCGGTCACT TCCGCACCGA AAGCCAAACC GAGGATGGCG AGGCCAAACG CGACGACGAG
AACTTTACCT TTGTGGCTGC TTGGGAATAC AAGGGCGTTG GCACCAAACC AACCATGCAC
AAAGAAGTTC TCGAATTTGA AAACGTTCAC CTTTCAACTC GTTCGTACAA GTAA
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| Protein sequence | MQLNAKIPAG PLEDKWDQHR FNVKLVNPAN KRKYTVLVVG SGLAGASAAA SLAELGYNVK
CFCFQDSPRR AHSIAAQGGI NAAKNYQNDG DSVRRLFYDT IKGGDYRARE GNVYRLAQVS
VNIIDQCVAQ GVPFAREYGG VMANRSFGGA QVSRTFYARG QTGQQLLIGA YSALERQIGL
KKVAMYSRCE MLDIVLVDGK ARGIITRDLI NGKIERHAGD AVVLATGGYG NVFYLSTNAK
GCNVTASYRA YKRGAAFANP CFTQIHPTCI PVAGDHQSKL TLMSESLRND GRIWVPKKAG
DNRAAKDIPE SERDYYLERK YPSFGNLSPR DISSRAAKEV CDEGRGVGPG GLGVYLDFSD
SIKRLGKNMI AERYGNLFEM YERITGENPY EVPMRIYPAV HYTMGGLWVD YNLMSNVEGL
HVLGEANFSD HGANRLGASA LMQGLADGYF ILPYTIGDYI ASAKLAPVST DHPAFAETER
EVTTRLKQLL EINGKRSVDD FHRELGKVMW DYCGMARNDA GLRTALERIP QIREEFWRDL
RVPGSGEYFN QELEKAGRVA DFLEFAELMC HDALMRTESC GGHFRTESQT EDGEAKRDDE
NFTFVAAWEY KGVGTKPTMH KEVLEFENVH LSTRSYK
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