| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1707 |
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| Symbol | |
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| ID | 5733594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 1985838 |
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| End bp | 1988378 |
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| Gene Length | 2541 bp |
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| Protein Length | 846 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641278849 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001544478 |
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| Protein GI | 159898231 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4995] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGCTT TCGATGCCGA TTCGACCTAT CTCGCAGTGC TGTTGGTGTT TGAGCCATTT
GATTCTGAAT TATGGCCGCT ACTGGCTCCG GCTGCGCCAA GCGTCGAGCA ACTTCAAGCT
GCTGGTTGGT TGCAAGCGAG CGCCGCTGGA TTAAGTTTGC TGACAGAGCG CCGCGAACAG
CTGCAAGCCC AGTTCGATTC GGCCAGCATT CGCGCAGCCT ATCAGCAATT AATCGCTGCT
GAACTGAGAT TAAGCGACAA TCAACCAGCG TTTGCCGCCC GTTTATTTGC CGATCTGCGA
ACGTTTGCCG AGTTGCTGAT TCGCCAAGCG CCACATGAAC TGGCCGATCT GGTCAATCAA
ATTCCAGTTG ATTTAGCGCC AACCAAGGCC GATCGCCAAC TGTTGGAGTA CTACCGTGGC
CTCGCCGCTG GCCTGCGTGA TCAATATGCA GAGGCATGTA CGTTGCTCAG CCAATTATTG
GCGCAACCAG ATTTGGAGCC AATGATTCGC GGGCGGGCGC TCAACTCCGA TGCCACGTTT
GCCCGCTACA GTGGCAATTA TGATCGGGCG TTGGCCAATT ATCAAGCCAG TTTTGCGCTG
TGGGAAGCCC AGGCTGATCC AGTTCGTCAA GCCTATGTGC TGCTGAATGA AGGTAGTTTG
CGCTACCACC TGCAAGAATA TCGCGCTGCT GAACGCTGCT TGAATAGCAG TTTAGCGACC
TTACAAGCCC AAAATTTATT GTATCCCCAA GCTTTGGTGC TGATCAACCT TGGTTTGTTG
GCGCGTGATC GTGGCAATTG GGCGCAGGCC TTAAGCCATT TTCGGCAGGC TGAAGCTATT
TTGCAAGCTG AAAATGCCAC CGATTTTCTG GGGCGCATCG CCAATAATTT GGGCGAATTA
GCCTTGTTGC AGGGCCAATA TCAAGCTGCT CGTGAGCATT TTGAGCAAGC CCTAGCCCAG
ATGAGCAGTC GAGTTTATCA CATTGATGCC TACTTGAATT ATGGTTTGGC CTGGCATGTT
GAAGGCATGT TTGAGCAAGC TGAAACCGCC TATCGCCAAG CGCTCGATCT GGTGGAAAGC
GTTGAGCGCC AAGAAATCGC CGCTTTAGTT TGGTTTCGTT TGGGCCAAGT TGCAGCGGCT
CGCAATGATC ATCACCAAGC CGAGCAGCAT TATTTGCAAG CAATTGAGCT GATCGAGGCG
ATGCGTGCAC CCATTTTGGC CGAAAGCTTG CAAATTAGTT TGATGGGGCG GTGGCAACAG
GTCTACGAAG GGGCGGTGGC GGCCTATCTC GCTCAATCCA ATGTTGAAGC TGCCTTTGTG
ATGGCGGAAA AAGCCCGTGC TCGCGCACTC AACGATTTGC TGGCCCGCAA CGGCCAAACC
AACCAAGCAA TTGGCACAAT TCCCAGTTTG AGTGAGTTGC AACAAAGCTT GGCGCAGGGC
AGCCTTATGC TCGATTATAT GACAATTGGT GCGGTTGGGC CTGAGGCCAG TTTGTTGGCG
GCTTTGCCTG CGAGTGCCAA AGCCTTGCGC AGCTTGTTAA TCCAGCCGGC AGCAACTTGG
CTATTTGCAA TTACCGCTGA GCAAGCTCAA GCCTTCAATT GCCAAATCGA CCCCAATATT
CTCTTGGCGA CCTCACCATT TCAGTGTGAT GGACGACGCT TTTTGCGTCC GGCAATTTTG
CAGCGCTTGC AGCAACGTTT GCTTTTGCCA GCTCAAGCTT ACTTACAACA GGCGCAACAG
GTGATTATCG TGCCGCATGG AGCTTTGCAT CATGTGCCGT GGAATGCCCT GTTGCTGGGC
GAACTTCAGC TTGATCTGCC TTCGACTACC ATTCCAAGCG CTGCTAGCTA TTTGCAATTG
AGCCAACGCC CACCGAGCCA AGCTCCCGAG GCTTGTGGGG CATTAAGTTA CGCTGGTGGG
GTTGAACCAG CCTTGGTGCA TACGCATGCC GAGGCCGAAG CAGCGGTGCA GGCACTTGGC
GGCCAGCATT ATCCATTGCC AGTGCCCAAT ATTCAACAAG CGCTTGGCAA TTATCGCATT
GTGCATATTG CCTGCCATGG CGTGTTTGTG CTCGACCAAC CTTTGGCTTC ATGGCTGCAA
TTTGGGCCTG AGCAAACCGT CTCGGCTTTG GAGATATTAA CAACTTGGCA ATTAGCCGCT
GATTTGGTGG TGTTGAGTGC TTGCCAAAGT GGTGTGAGCG AAATTGTGCG GGGCGACGAG
CCATTTGGTT TGGTGCGGGC ATTTTTGGCA GTTGGCGCAC GCGCAGTGTT GGTCACACTA
TGGCCAGTTG ATGATGTGGC CAGTGCGGTG TTGATGAAGC TATTTTATCA AGCCCTGCAA
AGCGGTGCTG CCCCCGCCGA GGCCTTACGC CAAGCAGTGC AACAGATTCG CAGCATGCCT
CAAACACAGG TAGCTATGCC GCTTGCTCCA AGCCAGCAGA CAGAGTACCC GTTCGCCGAT
CCGCATTATT GGGCGGGCTA TCAGTTAATT GGCGTTGGCA GCTCGATTTC TACTGTCAAG
CCAGCCACAT CAGCCGCTTG A
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| Protein sequence | MTAFDADSTY LAVLLVFEPF DSELWPLLAP AAPSVEQLQA AGWLQASAAG LSLLTERREQ
LQAQFDSASI RAAYQQLIAA ELRLSDNQPA FAARLFADLR TFAELLIRQA PHELADLVNQ
IPVDLAPTKA DRQLLEYYRG LAAGLRDQYA EACTLLSQLL AQPDLEPMIR GRALNSDATF
ARYSGNYDRA LANYQASFAL WEAQADPVRQ AYVLLNEGSL RYHLQEYRAA ERCLNSSLAT
LQAQNLLYPQ ALVLINLGLL ARDRGNWAQA LSHFRQAEAI LQAENATDFL GRIANNLGEL
ALLQGQYQAA REHFEQALAQ MSSRVYHIDA YLNYGLAWHV EGMFEQAETA YRQALDLVES
VERQEIAALV WFRLGQVAAA RNDHHQAEQH YLQAIELIEA MRAPILAESL QISLMGRWQQ
VYEGAVAAYL AQSNVEAAFV MAEKARARAL NDLLARNGQT NQAIGTIPSL SELQQSLAQG
SLMLDYMTIG AVGPEASLLA ALPASAKALR SLLIQPAATW LFAITAEQAQ AFNCQIDPNI
LLATSPFQCD GRRFLRPAIL QRLQQRLLLP AQAYLQQAQQ VIIVPHGALH HVPWNALLLG
ELQLDLPSTT IPSAASYLQL SQRPPSQAPE ACGALSYAGG VEPALVHTHA EAEAAVQALG
GQHYPLPVPN IQQALGNYRI VHIACHGVFV LDQPLASWLQ FGPEQTVSAL EILTTWQLAA
DLVVLSACQS GVSEIVRGDE PFGLVRAFLA VGARAVLVTL WPVDDVASAV LMKLFYQALQ
SGAAPAEALR QAVQQIRSMP QTQVAMPLAP SQQTEYPFAD PHYWAGYQLI GVGSSISTVK
PATSAA
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