Gene Haur_1669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1669 
Symbol 
ID5733553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp1936354 
End bp1937031 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content47% 
IMG OID641278808 
ProductTetR family transcriptional regulator 
Protein accessionYP_001544440 
Protein GI159898193 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.0413702 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTATGATA GTAGGCTAAA AAACCTGCGT CAACCAACAA TAAGCTACAA GTGTTGTTTA 
GTTGCAAAAT TAGGTACAAC TTTGATTCAT GTTGATTTGC CAATCGACCC ACGGATTACC 
CGCACGCGCC AACGGTTAAT CGATGCCTTT AATCAGTTGA TGCATGCAAA ATTGTTTGAT 
GAAATTACTG TGCGGGATAT TGCCCGCCAA GCTGGAGTCA ATCGCGCGAC ATTTTACGCG 
CATTTTCCCG ATAAACATGC CCTGCTCGAT GCGATTATGG CGATTTGCTT TGCCGATACC 
TTGCAGCGCT GGCTGGTTGG GCCGCTTGAT GATCCTGAGA TTTATTTAGA ACGACTATTT 
TTGGCAATTA CCGATCAGCT AACGATGTTT AATGGCACCG AATGTCAAGA TACCTTTTCG 
ACGTTTGAGG CGGTGATTGA GGTACAGATT AAGGCTCAAG TTTGCAAACA TATTCAGGCT 
TGGTTTCGCC AACATATCCC AGCCCAAGTT TTGCGCTATC AGCCGCTTGA ATTGAGCGCC 
GCGCTGGTGA GTTGGGCCTT GTATGGAGCG GCGCAAGAAT GGAAAACTCG CGCCCGTACC 
CAATCACCAG CAGCGTTTGG CCGCCAAGTC ATCCCTTTAA TTAGCGCCAT GGTTGATCGA 
TTTACCCATG AGCGCTAG
 
Protein sequence
MYDSRLKNLR QPTISYKCCL VAKLGTTLIH VDLPIDPRIT RTRQRLIDAF NQLMHAKLFD 
EITVRDIARQ AGVNRATFYA HFPDKHALLD AIMAICFADT LQRWLVGPLD DPEIYLERLF 
LAITDQLTMF NGTECQDTFS TFEAVIEVQI KAQVCKHIQA WFRQHIPAQV LRYQPLELSA 
ALVSWALYGA AQEWKTRART QSPAAFGRQV IPLISAMVDR FTHER