| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1627 |
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| Symbol | |
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| ID | 5733499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 1886872 |
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| End bp | 1887753 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641278766 |
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| Product | apurinic endonuclease Apn1 |
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| Protein accession | YP_001544398 |
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| Protein GI | 159898151 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0648] Endonuclease IV |
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| TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00209687 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCAATT TAGGAGCGCA TGTTTCAACC GTTGGTGGGT TGCAGACCGC CTTTGAGCGA
GCGCAAGCCA CGACCTGTCA TGTGATTCAA ATTTTTACCA AAAGCCAACG CCAATGGAAT
GCCAAACCGC TGACTGCTGC CGATTGTGCC AATTTTCAAG CGGCCCATCG TGACGCTGGC
ATGCCACCCT TGATTGCCCA CGATTCCTAT TTGATCAACT TGGGCAGCCC CGACAATGGC
TTATGGGAAA AATCGATTGC AGCCTTTCGC GTTGAGCTAG AGCGTTGTCA GCAATTGGGA
GTTGGCTCGT TGGTGACCCA TCCTGGGGCG CATGTTGGCT CAGGCGAGGC CGCTGGCCTT
GATCGGGTTG GCGCAGCCTT GCGGCGTTTA CTGGCCGAAG ACGTTGGCGG CGAAACCCAG
ATTTTGCTCG AAATTACTGC TGGACAAGGC ACGGCCTTAG GTCATAGTTT CGAGCATTTG
GCTCGCTTGA TCGAGCTGTG CGATGGTCAT CCACGGCTTG GAATTTGCTT TGATACCTGC
CATGGCTTAG CTGCTGGCTA CGATTTTCGC ACTGCTGAAG GCTACCAAAC CACCTTTGAT
CATTTTGATC GTTTAATTGG GATTGATCGG CTGCGGGCGT TTCATCTTAA CGATTCGAAA
AACGATCTTG GCAGTCGGGT TGATCGGCAT ACCCATATTG GTGAGGGATT TGTGGGCTTA
GAAGGGTTTG AACTCATTAT GAACGATCCT CGCTTTCAAA CGATTCCGAT GGCCTTAGAG
ACTCCCAAAG AACCCGATGA AAGCGCAGAT ATTCGCAATT TGGCAACGTT GCGCGGTTTG
CGCCGCGCAA GCGTTAGTGC ATCACCACAA AGCGAGGTAT AA
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| Protein sequence | MPNLGAHVST VGGLQTAFER AQATTCHVIQ IFTKSQRQWN AKPLTAADCA NFQAAHRDAG
MPPLIAHDSY LINLGSPDNG LWEKSIAAFR VELERCQQLG VGSLVTHPGA HVGSGEAAGL
DRVGAALRRL LAEDVGGETQ ILLEITAGQG TALGHSFEHL ARLIELCDGH PRLGICFDTC
HGLAAGYDFR TAEGYQTTFD HFDRLIGIDR LRAFHLNDSK NDLGSRVDRH THIGEGFVGL
EGFELIMNDP RFQTIPMALE TPKEPDESAD IRNLATLRGL RRASVSASPQ SEV
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