| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1477 |
|---|
| Symbol | |
|---|
| ID | 5733362 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 1725813 |
|---|
| End bp | 1727123 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641278615 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001544249 |
|---|
| Protein GI | 159898002 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1030] Membrane-bound serine protease (ClpP class) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.135375 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGACAGC TGCGAATCCT AGCTTTAATT GTTTGGCTAA GTTTGGTAAC CCTACCAAGC
TTGAGTTATG CTGCGACTGA CGATGCTATG TGTGTGGCTT CGGTCAGTGG CATTATCAAT
CCAGCGGTTG CCGATTATCT GCAACGGAGC GTGATCCAAG CTGAACAGCA AGCATGTCAA
GGTTTAGTGA TTAAATTAAA CACGCCTGGT GGGCTAACAA CCTCAACTTG GCAAATTGGC
GAGACTGTAC TCAATGCCAA ATTGCCAGTG ATTGTCTATG TTACGCCCCA AGGTGCGAAT
GCTGGTTCGG CTGGAGTTTT TATTACCTAT GCTGCCCATA TTGCCGCAAT GTCGCCCAAT
ACCAACATTG GTGCGGCCCA TCCAGTCGAT GGGAGCGGCG TAGATATGGA AGGTGATCTG
CGCGATAAAA TTACCAACGA TGCCGTTGCG CGAATCACCA CTTGGGCCGA ATCGAATGAT
CGGGATGCTG AATGGGCTGA GCAAGCAGTG CGCCAAAGTG TTTCGATTGG TAGCAACGAG
GCACTTGAAC TCGGTGTGAT TAATCTGATT GCCCAAGATG ATGCTGATTT ATTGCGTCAG
CTTGATGGCC GCGAAGTAAC CTTGGCCAAT GGTAATCAGG TGACGCTGCA AACCCAAACC
AGTGCTTTCC AACCAATTGA AATGACGTGG CTCGAACGGC TTTTGCACTT CTTGGGCGAC
CCCACGATTG CCACAATGTT GATTAGCCTC GGTAGCTTGG GCATTTATTT CGAGGCGGCC
AACCCAGGTT TAGGCGTGGG TGGTTTCTTG GGCGTAATCG CGATTTGCTT GGGCTTGTAT
GGCCTCAGTG TACTGCCGCT CAACACGGTT GGGGTGGTGC TGCTGATTCT GGCTTTTGTG
CTATTTGGGA TTGATATTTT TGCGACCGCA CACGGAGCTT TGACGGTTGG TGGCCTAGCT
TCATTTGTGA TTGGTGCCTT GTTGCTGGTT GATCCAGCCG AAGCACCTGG GATTATCGTC
TCACGCGCCT TGATTACAGG CCTTGGCCTT GGGCTGGCAA GCGTGATTGG GCTAAGCATT
TGGATTATTC GCCGCAGCAA GCGCGTTGGT CGTGGAGCCA GCGGCGATCG TTTGGTTGGC
ACAATTGCTA AAGTTCGTTC GTCAGTTGCG CCTGAAGGCA CGGTATTTGT TGAAGGAGCC
TTGTGGCAAG CCCGTTCCGA TGATGTATTG ACCGTAGGCG ATCAGGCTGA AATTGTTGGT
TTAGATGGTT TAACCTTGAT TGTGCGTCGA GTGGCGCATA GTGGGCGCTA A
|
|---|
| Protein sequence | MRQLRILALI VWLSLVTLPS LSYAATDDAM CVASVSGIIN PAVADYLQRS VIQAEQQACQ
GLVIKLNTPG GLTTSTWQIG ETVLNAKLPV IVYVTPQGAN AGSAGVFITY AAHIAAMSPN
TNIGAAHPVD GSGVDMEGDL RDKITNDAVA RITTWAESND RDAEWAEQAV RQSVSIGSNE
ALELGVINLI AQDDADLLRQ LDGREVTLAN GNQVTLQTQT SAFQPIEMTW LERLLHFLGD
PTIATMLISL GSLGIYFEAA NPGLGVGGFL GVIAICLGLY GLSVLPLNTV GVVLLILAFV
LFGIDIFATA HGALTVGGLA SFVIGALLLV DPAEAPGIIV SRALITGLGL GLASVIGLSI
WIIRRSKRVG RGASGDRLVG TIAKVRSSVA PEGTVFVEGA LWQARSDDVL TVGDQAEIVG
LDGLTLIVRR VAHSGR
|
|---|
| |