| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1421 |
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| Symbol | |
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| ID | 5733329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 1639891 |
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| End bp | 1642878 |
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| Gene Length | 2988 bp |
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| Protein Length | 995 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641278559 |
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| Product | protein serine phosphatase with GAF(s) sensor(s) |
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| Protein accession | YP_001544193 |
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| Protein GI | 159897946 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGCCA GTTTTGATCG TGGAACCCGA CTCTCGAAAC ATCGCATGGT GGCCCTTGGT
TGGGCTACCA TGCTCTTTTT GTTGGCAAGT GCCAGCATTA TTTGGCAAGG CTTGCCAATC
TTCAACTCGG CTACCTTGCC AGTAGCTGGC GCGTTATTGC TGTTGCTCGA TGGCTTGGCA
GTGCGCGATC GTTCGAACCA ACCGCTTAGC CTCTCCGGCA TTGTGCTCTT GGCCGTGGCG
TTGATCAGCA CGCCGAGCAC AACTTTGGTT TTAGCCGCTG CCTCGGGTTT ATGCATTCGG
CTGAGTCGTT TGGCCCGCTC ACGCTACGAA GAATGGGGCC GCCGCGCCCT TGAGGCTGGC
GCACGTACCT TGGGCATCGC GCTCGTCCTG CCATTTATCA GCGATTTTGG GCTGTGGTCA
AAACTGATCA TGCTCATCAT TAGTTATATC GTGGTGGTTC AAGGCGCACG CTTGATCTTT
GCTTTGCTCT GGGATGGCAA GCAAATCACC ATGGGCACGT GGCAGGTCAG CGCTCCGAAT
ATTTTCTCAA TTGAAATTTT GCCCTTGCCG CTGGCGGCAA TTGGTGCCCA AATGGCCGAA
GATTTTCCAT TTAGTTTGGT GGCAATCTCA GCAGCAGGCT TGGTTGGCAG CGCATGGATG
GTACAACGTG CCAGCCGATC ATTAGGTTTG CAGCGCCGCA CCGTGGCTGA ACTTGGCCAA
ATTAATGCGA TCAGCCGCGC GATCATTCGC GCCGAATTAG ACGTTGATTC GCTGTGTCAG
TTGGTCTATG GCGAGACCAG CAAGGTTGTC GATACCAGCA ATTTTCGCTT GGGCTTATTT
GAAGGCCGTT TCTTTGAACT CAAAGTGCGG GTGCAAGATG GCCATCATGA GCCACCATTG
CGCGTCGAAC TCCCCAATGA TCGTGGCATC GTCAGTTGGA TTCGGCGCAC AGGTCGCTCA
TTGTTGGTCG AAGATTTCGA CAGCGAAATG GATCGCTTGC CAGCCCAGCC AACCTATCAA
GCCGAATATC CGCCACGCTC AGGGGTTTAT ATTCCCTTGA TGACTGGCGA TGAGGTTTTA
GGCACAATTT CGATTCAAAG CAGCGAACCA CGTGCTTTTG ATACCGACGA TTTACGCTTG
CTCTCGCTGA TTGCCGACCA AGCTGCGGTG GCGATTGACA AGGCACGAGC CTACTCAGCA
GCCCGTCGTC GCGCTGCCCA ACTAGCCACT ATCGGCGAAG TTAGCCGCCA AGTTACAGCG
ATTCTCGATT TAGATCGTTT GTTGCCTTCG GTAGTGCATC GCATTCGGGT CAGCTTTGGT
TATTCGCAAG TGCATCTTTT TACCTTTGAT GAATTGCATC AACAGCTTTT CTTCCGTGCC
AGCACCGCCA GCGATAGCCC ATTTTGGCAA CGCCAAGGCA AACGCTTACC GTTAGGCCTT
GGTATCGTTG GCCATGTCGC CGTCACTGGC GAACCAATGC TGGTTAATGA TGTGCGCGAA
GAACCACGTT TCTTGCCCGA TCAACATGGC ATCGCCGCCG AACTAGCCGT GCCCATGCGT
GTTGGACAGC AGTTGCTCGG CGTGTTGGAT GTGCAAAGCG AGAGCTACGG CGCATTTGAT
GAAAATGATT TCTTCGTGGT GCAAACCCTT GCCGATCAAA TTGCGATCGC GATTGATAGC
GCCTCGGTCT TCCAATCGCA ACAAGAGGAA GCTTGGGTGC TGAACGCCTT GTTGCAATCA
GCCGAAAATT TTGCCTGGGT CAGCGAGATC AGCGAAATGC TCTATCTCAG CGTGCGCCTG
CCAGCCTTGT TGGTTGGTTG CGAACGCGCC TTATGTCTCC TTTGGCAGCG TGAAAGCAAT
CGCTGGATTT TGGCTGAAGG CTGGGGCTTG ACCAACGAAC AACGCCAATC AATTGGTGCA
AGCGCTACCG ATGAGCAAGT GCCATGGCTC GAACGGATGC GTTCTGAAGG CGAATCGTTT
GCTGCTGAAT TGGTCGATCT CGAACAGCTT TCAAGCGCAG GCTTAGTGCC CTACAGCAGC
TATGGGGCAG TGCTGGCCCA ACCGCTCAAC TCACGCGGAG CCACGCTGGG GGTGCTGTTG
CTTGAGCAAT GCGGCCACGA CGAAACTTGG CTGCCACGCC AAATTACTAT CGCCGCTGGA
ATTGCTGGCC AAGCTGCGGC GGCGATTGAA AGCGCCTTGC TGGCGCAAAT CGAAGCTGCC
CGCCAACATA TCGAACAAGA AATTAGCGTG GCCCGCGAAA TTCAAATGAG CTTGTTGCCA
TCGCGCTTGC CGCAACTTGC GGGCTGGGAT AGCGGCGCAC ATTGGAATTT GGCCCGCCAA
GTTGGCGGCG ATTTCTACGA TTTTTGGAGT TTTCGCAGCG GGCCTTCGGC AGGTGAGATG
GGCTTTGTGA TTGCCGATGT CTCGGATAAG GGCGTGCCTG CGGCCTTGTT TATGGCACTT
TCGCGCTCGT TGGTGCGTGG TGCGGCGCTC GATGGCTCAC CACCATCACA GGCGATCGAA
CGTGCCAACC GCTGGATTAT GCGCGATAGC CAATCGTATA TGTTCGTAAC GCTTTTCTAC
GGAATTATTA ATCCAGTGAC TGGGCGTTTA CGCTACACTT GTGCTGGGCA TAATCCGCCA
TTGCTGTATC GCGCCGCTAC AGGCCAGATC GAGCAATTGC GCACACCTGG AATTGCCTTG
GGCGTAATCG ATGATGCAGT TTTAGGCGAA GCTGAAACGA TTATTGAATT AGGCGATGTT
TTGGTCTGTT ATACCGATGG CGTAACCGAG GCAGTTGATA GTACAATGGA TGAGTGGGGC
GTGCCACGTT TGATGGAGAC AATTCATCAG ACCGCCCATT GCGATGCAGC GACTATGTTG
CATACAATTA GTAGTCGCCT TGCGGCGCAT ACTGGCGATT TACCAGCCTT CGATGACCTT
ACTTTAGTGG TGATTAAACG GCTGGCCGAT GCCAATCAAC CTGTTTGA
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| Protein sequence | MLASFDRGTR LSKHRMVALG WATMLFLLAS ASIIWQGLPI FNSATLPVAG ALLLLLDGLA
VRDRSNQPLS LSGIVLLAVA LISTPSTTLV LAAASGLCIR LSRLARSRYE EWGRRALEAG
ARTLGIALVL PFISDFGLWS KLIMLIISYI VVVQGARLIF ALLWDGKQIT MGTWQVSAPN
IFSIEILPLP LAAIGAQMAE DFPFSLVAIS AAGLVGSAWM VQRASRSLGL QRRTVAELGQ
INAISRAIIR AELDVDSLCQ LVYGETSKVV DTSNFRLGLF EGRFFELKVR VQDGHHEPPL
RVELPNDRGI VSWIRRTGRS LLVEDFDSEM DRLPAQPTYQ AEYPPRSGVY IPLMTGDEVL
GTISIQSSEP RAFDTDDLRL LSLIADQAAV AIDKARAYSA ARRRAAQLAT IGEVSRQVTA
ILDLDRLLPS VVHRIRVSFG YSQVHLFTFD ELHQQLFFRA STASDSPFWQ RQGKRLPLGL
GIVGHVAVTG EPMLVNDVRE EPRFLPDQHG IAAELAVPMR VGQQLLGVLD VQSESYGAFD
ENDFFVVQTL ADQIAIAIDS ASVFQSQQEE AWVLNALLQS AENFAWVSEI SEMLYLSVRL
PALLVGCERA LCLLWQRESN RWILAEGWGL TNEQRQSIGA SATDEQVPWL ERMRSEGESF
AAELVDLEQL SSAGLVPYSS YGAVLAQPLN SRGATLGVLL LEQCGHDETW LPRQITIAAG
IAGQAAAAIE SALLAQIEAA RQHIEQEISV AREIQMSLLP SRLPQLAGWD SGAHWNLARQ
VGGDFYDFWS FRSGPSAGEM GFVIADVSDK GVPAALFMAL SRSLVRGAAL DGSPPSQAIE
RANRWIMRDS QSYMFVTLFY GIINPVTGRL RYTCAGHNPP LLYRAATGQI EQLRTPGIAL
GVIDDAVLGE AETIIELGDV LVCYTDGVTE AVDSTMDEWG VPRLMETIHQ TAHCDAATML
HTISSRLAAH TGDLPAFDDL TLVVIKRLAD ANQPV
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