| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1418 |
|---|
| Symbol | |
|---|
| ID | 5733326 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 1635363 |
|---|
| End bp | 1638146 |
|---|
| Gene Length | 2784 bp |
|---|
| Protein Length | 927 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641278556 |
|---|
| Product | cellulose 1,4-beta-cellobiosidase |
|---|
| Protein accession | YP_001544190 |
|---|
| Protein GI | 159897943 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCTG ACCACAGCCG TACCGTGATT GGTATCCGTT CGACGAGGAG CTTTTGGGCA
CGAGGATTTT TCGTCTTTTG GTTGATTATT GCTTTAGGCT GCCAACAAGC GATTGTTCCA
GCCACCTCTC AGATTTATGC CCAACCCCCG CAAACTGTTG GTAATTTGCT GCAAAATGGC
GATTTCAGCG CTGGTTTTGC GCCATGGTGG GCCACAAGCT CGGTTGCTAC TGATACTGCG
AGTGGCGCAT TAGTCGCAAC CATCAATAAT GCTGGTAGTA ATCCATGGGA TGCAATCGTT
GGCCAAAATG GAGTTACGCT TCAATCAGGC CAAACCTACA CCGTCACGTT TCGCATCCGT
GCCTCAACCA CTGGTACTGT GGTGATGAAA CTGCAAAAAG AGGCCTCTCC CTATACCAAC
TATTTTAGCC AAGACGTGGC TTTGACTACT AGCGATCAAG CCCATCAATT TGTCTTTACC
TCAGGCTTTG ATGATGCTGG GGCTGCTTTT CAATTTCAAA TGGGCGGCCA AGGCACGAAT
GTACTGACAA TTGACGATGT GCAAGTGTTG GGCGAAACTG GCCCGGTCGA GCCATCGGGC
AATTTGGTGC AAAATGGCGA GTTTGTTGGT GGCCTACCGC CTTGGTGGAC TGGCGGCGAT
GTCAGTGTGA ACACCGATGA TGGCGCGTGT TTGACGATCA ACACTCCTGG CACAAATCCT
TGGGATGTGC AGCTTGGTCA ACATACCATT GCGATTGAAG CTGGTGTGAG CTATCAGCTT
AAATTTGCTG CCAAATCAAC TGTGCCAGTC ACTTTGCCCG TGCGTTTGCA AAAAAATGCC
GAGCCATACA CTGGCTATTT TTCGGCTGAT CCAGTGCTCA ACTCGGCCTG GACAGAATTT
GTCTATAATT TTACATCGGC CTATAGCGAT GCAGCTTCGT TGTTGTTCCA AATGGGTGGC
ATCGGAACCC CGACGATCTG TATTGATCAG GTGAGTTTGT ATATGTTAGA AACCGGAATT
CGGGTCAACC AAGCCAGCTA TTTGCCCACG ATGAGCAAAG TGGCAAGTTT GGTGCATCCT
GCGACTGAGC CATTGGCTTG GCAATTGCAT AACACTGCTG ATGCAGTGGT GGCAAGCGGC
CAAACCACGG TGTATGGCGA AGAATCAGCC TCGGCTGAAC ATGTGCATTT GATCGATTTT
TCAAGCTACC AAACGGTTGG TGAAGGCTAT TATCTGAGCA TCGGCAGCGA AACGAGCTAT
CCATTTGCCA TCGAGGCAGG TTTGTATTCG CGGATGAAAT ATGATGCTTT GGCCTATTTC
TACCATAATC GCAGCGGGAT TGCGATTACC ATGCCCTATG CTGGTGGCGA GCAATGGACG
CGACCAGCTG GCCACATCGG GGTTGCACCC AACCAAGGCG ATACCTCGGT AACCTGTTTT
ACTGGCACTG ACACCCAAGG TCAAAGCTGG CCCGGGTGCG ATTATCAACT TGACGTTTCA
AAGGGTTGGT ACGACGCTGG CGACCATGGC AAATATGTGG TTAACAGTGG TATTTCGGTC
TGGACGTTGC TTAATCAATA TGAACGAGCG CAGCAACGTG GCCCTGCCAG CCTAGCCCAA
TTTGCCGATG GCACGATGAA TATTCCCGAA AATAACAATG GCGTGCCCGA TTTGTTGGAT
GAAGTGCGCT GGAATATGGA GTTTATGCTA GGAATGCAAA TTCCTACGAC TGCGCCAGTT
TCCAAAACGG GTATGGTGCA CCATAAAGTT CACGATGCGA ACTGGACTGG TTTGCCAATG
GCTCCACACG AAGATAGCCA AATGCGCTAT TTGTATCCAC CAAGTACCGC CGCAACCTTG
AACTTGGCTG CGACCGCTGC CCAATGTTCA CGGATTTGGC GTGAGATCGA TGAAGCCTTT
GCTGATCGAT GTTTGGTGGC GGCTGAACGC GCTTGGCAAG CAGCCTTGGC CTACCCTAAC
GAAATTGCCC GCGATAACTT CAATGGCGGT GGTGGCTATG GCGATAGCAC CTTGAACGAT
GAATGGTATT GGGCCGCCGC CGAATTGTAT ATCACAACTG GCTCGGCCAC CTATCGCGAA
GCAATTGAAG AATCGAGCTA TTACTTGCGG CTTGATCTTG GTGGTGGAAG CGCCATGAAC
TGGGGCGGCG TGGCAAGCCT TGGCACCTTG TCGTTGGCCT TGGTTCCCAG TGATTTGAGT
AGCGCGAATC GCCAAACTGC CCGTGCAGCA GTGATTGCAG CGGCTGATCA ATTTGTGGCA
GCGCAGCAAT CCAGCGGTTA TGGCATTCCA TACAATCCTG GTGCGCAGTA TCCTTGGGGT
TCCAACTCAT CAATTCTGAA TAATATGATT GTAATGGGTT TGGCAGGCGA CTTTACTGGA
AATGCCAACT ATGCCGATGC AATTAGCCAA GGCATGGATT ACTTGCTGGG GCGTAATCCA
CTCAATCGCT CGTATATTTC GGGCTATGGC TCGGTCTCAT TGACCAATCC ACATCATCGC
TTCTGGGCTA AGCAAATTAA TCCAGAGTAT CCTGGTACGC CGCCAGGTGT GGTGGCTGGG
GGGCCAAATT CAAGCATTCA AGACCCTTAT GCTCAAGTTG AATTAGCTGG TTGTGCGGCC
TTGAAATGCT ATGTTGATCA TATCGATTCG TGGTCAACCA ATGAAGTGAC GATTAACTGG
AACTCGCCGC TGGCATGGGT TGCGGCCTAT CTTGATGATT ATGATACAAG TTCGGTGCAG
TATCTGCCGT TGATCAGTAA GTAA
|
|---|
| Protein sequence | MSADHSRTVI GIRSTRSFWA RGFFVFWLII ALGCQQAIVP ATSQIYAQPP QTVGNLLQNG
DFSAGFAPWW ATSSVATDTA SGALVATINN AGSNPWDAIV GQNGVTLQSG QTYTVTFRIR
ASTTGTVVMK LQKEASPYTN YFSQDVALTT SDQAHQFVFT SGFDDAGAAF QFQMGGQGTN
VLTIDDVQVL GETGPVEPSG NLVQNGEFVG GLPPWWTGGD VSVNTDDGAC LTINTPGTNP
WDVQLGQHTI AIEAGVSYQL KFAAKSTVPV TLPVRLQKNA EPYTGYFSAD PVLNSAWTEF
VYNFTSAYSD AASLLFQMGG IGTPTICIDQ VSLYMLETGI RVNQASYLPT MSKVASLVHP
ATEPLAWQLH NTADAVVASG QTTVYGEESA SAEHVHLIDF SSYQTVGEGY YLSIGSETSY
PFAIEAGLYS RMKYDALAYF YHNRSGIAIT MPYAGGEQWT RPAGHIGVAP NQGDTSVTCF
TGTDTQGQSW PGCDYQLDVS KGWYDAGDHG KYVVNSGISV WTLLNQYERA QQRGPASLAQ
FADGTMNIPE NNNGVPDLLD EVRWNMEFML GMQIPTTAPV SKTGMVHHKV HDANWTGLPM
APHEDSQMRY LYPPSTAATL NLAATAAQCS RIWREIDEAF ADRCLVAAER AWQAALAYPN
EIARDNFNGG GGYGDSTLND EWYWAAAELY ITTGSATYRE AIEESSYYLR LDLGGGSAMN
WGGVASLGTL SLALVPSDLS SANRQTARAA VIAAADQFVA AQQSSGYGIP YNPGAQYPWG
SNSSILNNMI VMGLAGDFTG NANYADAISQ GMDYLLGRNP LNRSYISGYG SVSLTNPHHR
FWAKQINPEY PGTPPGVVAG GPNSSIQDPY AQVELAGCAA LKCYVDHIDS WSTNEVTINW
NSPLAWVAAY LDDYDTSSVQ YLPLISK
|
|---|
| |