Gene Haur_1229 details

Gene Information

• Locus tag: Haur_1229
• ID: 5733122
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Herpetosiphon aurantiacus ATCC 23779
• Kingdom: Bacteria
• Replicon accession: NC_009972
• Strand: +
• Start bp: 1422206
• End bp: 1424233
• Gene Length: 2028 bp
• Protein Length: 675 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 641278369
• Product: PKD domain-containing protein
• Protein accession: YP_001544005
• Protein GI: 159897758
• COG category: [S] Function unknown
• COG ID: [COG5276] Uncharacterized conserved protein

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCACACAC ACAATGGACG TTGGTCGCGT TCGTTAGCGG TCGGTTTTGC GGTGTTGGCG 
GCGTTTGTGT TAGCGCCAAT TGCTTCGATT TCGGCCCATA GCAATCATGA TCATAAGATT 
TATGTTGCAC CATTTGGCAA AGATGAGGGT GATTGTTCGA AGATTTGGCA GCCCTGTGCG 
ACGATCGATT ATGCGATTAG CCGCGGGACT GGCAAGGGTG ATGAAATTCG GGTTGCTGCT 
GGCGATTATA GCTACGATGC TCAGGCGGTT GGCTTATTGC TGAGCCGCCA GATTCCGGTG 
CACGGTGGTT TTAGCGCTCG TGATAATTTC ATGCAGCAGG ATACCAAGGC CAATCCAACC 
TATATCGCTG GGATTCCTAG CCGCTACCGC GAACGCTTGG CGGCAATTGG CTTTGCGCGG 
GTCGAAGATC GCGATGGTCG CAATACCCCA GAACTTGAGC GGATGCAAAT TCCAACTGAA 
TTGGAAACGC CAAGTGCTGC TCAGCCTTGT ACCAATGGTA TGGCTGGCAT CTTTGAGTGC 
AACGGCATCG ACTTCTTGGG CAGCGTGCCG CTCTCAAGTT TTCGGGTAAA TGGTAGTGGA 
GCCACCGATG GCAGCAACTT GTGGGGCCAC GTCGATCTCA ATACCGATCG CGAATATGCG 
ATTATTGGGG TTAACAATGG CACTGGCGTA GTTGATGTGA CTGATCCCAC CAATCCGGTG 
GTGATTGGCA CGGTGCCAGG TAATAATTCG CAATGGCGCG AAGTTAAGGT CTATCAATAT 
TTCAACCAAG CCCAAAATCG CTGGAACGCC TATGCCTATC TTTCAACCGA AAATCGTACC 
CAAGGGTTGC AGATCGTTGA TCTCAATCAC TTGAGTGATC CAACGCCTTC GGTTAGTTTG 
GCGGCAACCT ATACCGCCGA TTTTGGCTCA TCGCACACTG TCTATATTAA GAATGTTGAT 
TTCAGCACCA ACGTAGCGTT GCCTGGTAAA ACTGCGGCGT TGTATATGAA CGGGGTCGGC 
AAAAACGGCA GTCGCTTGAG TTCAGGTGTG TTCCGCGCCT TTGATATCAG CAATCCGTTG 
ACTCCGCAGA TTATTGATAG TGGCGTGCCG GATACCAATA TTAGCTACAC CCACGACGAT 
ACCAGCATGA TCATTACCGA TTCGCGGACT TCGGCATGTG CGCCTGGTCA CCAAGCCTCG 
TGCGAAATAA TGTTTGATTT CAGCGAATCG TCGGTCGAAA TTTGGGATAT TACCGATTCG 
GCTGCCCCAT TCCATATTAG TTCACGGCCT TATTCGGGCA GTGGCTACAC CCACTCAGGC 
TGGTATAGCG ACGATAAAAT GTACGTCTTT ATCCAAGATG AATTGGATGA ACAAAATTTT 
GGCCACAACA CTCGTGTGCG CACGATGGAT ATTCATGATC TGGATAATCC AACCATCAGC 
GCGACGTGGG ATGGCCCAAC TCGGGCAATT GACCATAACG GCTACACGAT TGGCAACAAA 
TATTATATGT CGAACTATTT GCGTGGTTTG ACGATTCTTG ACATAACCAA TCCAAATAAC 
ATCCAAGAAG CCGCTTTCTT TGATACCTAT CCTGGTAGCA ATTCGGCCAG TTTTGATGGA 
GCTTGGGGGG TTTATCCCTA CTTGCCAAGC GGCACCTTGA TGATCAGCGA TATTTCACGC 
GGCTTGATTT TGGTGCGCGA ACCAACTAGT ACCCCTGATC AAGCGATTGC TGGCTTGGAA 
GCAACCAACG ATGGCCCAAC CGTTGCTGGC GAGGCGACCA ATTTTGATGC AGCAATTCGG 
GCTGGTACAA ACGTGACCTA TGCGTGGGAT TTTGGTGATG GTACAGCTGT GGTAACTTCA 
ACCAACACCA CGATGAGTCA TACCTATCCA AACGTTGGTA ATTATACGGT TGAGTTAACT 
GCCAGCAATG GTACTAATTC GCAAACAGCT ACAACAACCG TGGTGGTGCA AGCGCCACCA 
CAAACCGAAT GGAAAATTTG GCTGCCCTTT GCGATTCGGG CGGAATAA 

 

Protein sequence

MHTHNGRWSR SLAVGFAVLA AFVLAPIASI SAHSNHDHKI YVAPFGKDEG DCSKIWQPCA 
TIDYAISRGT GKGDEIRVAA GDYSYDAQAV GLLLSRQIPV HGGFSARDNF MQQDTKANPT 
YIAGIPSRYR ERLAAIGFAR VEDRDGRNTP ELERMQIPTE LETPSAAQPC TNGMAGIFEC 
NGIDFLGSVP LSSFRVNGSG ATDGSNLWGH VDLNTDREYA IIGVNNGTGV VDVTDPTNPV 
VIGTVPGNNS QWREVKVYQY FNQAQNRWNA YAYLSTENRT QGLQIVDLNH LSDPTPSVSL 
AATYTADFGS SHTVYIKNVD FSTNVALPGK TAALYMNGVG KNGSRLSSGV FRAFDISNPL 
TPQIIDSGVP DTNISYTHDD TSMIITDSRT SACAPGHQAS CEIMFDFSES SVEIWDITDS 
AAPFHISSRP YSGSGYTHSG WYSDDKMYVF IQDELDEQNF GHNTRVRTMD IHDLDNPTIS 
ATWDGPTRAI DHNGYTIGNK YYMSNYLRGL TILDITNPNN IQEAAFFDTY PGSNSASFDG 
AWGVYPYLPS GTLMISDISR GLILVREPTS TPDQAIAGLE ATNDGPTVAG EATNFDAAIR 
AGTNVTYAWD FGDGTAVVTS TNTTMSHTYP NVGNYTVELT ASNGTNSQTA TTTVVVQAPP 
QTEWKIWLPF AIRAE