Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_1093 |
Symbol | |
ID | 5732984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 1249366 |
End bp | 1251444 |
Gene Length | 2079 bp |
Protein Length | 692 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641278231 |
Product | glycosyl transferase family protein |
Protein accession | YP_001543869 |
Protein GI | 159897622 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTATGC GTTTGCAGCG TTCTTGGCTC AGCTTTGCGA TTCTTTTTGG CCTGATGGGT TTGGGCTTGG GGCTGCGACT CGCTGCGTGG CATTGGCATG AATTTCGGCC ACTGGGCGGC GATGAGCGCG AATATTTGGA TTTGGCAATT GCCTTGGCCC AAGGCAAAGA ATACTACGAT TTGCAATTTA TGCGGCCACC GTTGTTTCCC TTGGGCTTAG CCGCGCTGGT TTGGCTGGTC GATGGAGATT TGCAGGGCTT GCGGCTGATT AATGCGCTGA TCAGCACCGC CACGATTCCC TTGGTTTGGT GGTGGGCACG GCTGTTGCTA CGCCGCAACG ATTTGGCTTT GATCGCCGCT GGCTTGACTG CTGGTTCATT TACCTTGGCC TTGAATGCCA CCGAATTGCT CAGCGAAACT GTCACCTTGG CAGGCTTGAT GCTGGTGTTT GGTTTGTTGA TGTTGGCCTT GCGCCGCCCA CAATTGCGTT GGAGTATTGC CGCTGGCGTG GCGATTGCGC TGGTTAGTTT AATTCGCTCG GTGGCCTTGC CGTTGTTGCC ATTAGCCTTA TTGTTACTTT GGCGTAGCGA TAATCCACGG CGCTGGCGGC AGATGCTCGG TTTGCTGGCC GCAACGCTGC TGACGCTTGC TCCATGGACA ATTCGCAACG CCCTGACCTA TGATGGCTTT ATTCTGATTG ATACGACTGG TCAGGAAAAT CTCTGGCTGG ATAACGATCC ACGTGGCCGC GATCTGGTTA AAGCTGAGTT ATATGCAATG GGCGATGCGC GGATTGAGCG CAGCCAATTG GCCTCACAAC AAGGAATCGC GGCGATAACC CAGAACCCTG ATTGGTTTTT TGCCAAGGTT GGACGCGAAT TTTGGCATAG TTGGGGCTTA GAGCATAGCG ACGATTTGCT GGCGCGACGA GCGATTTGGC GACCAGCTAG CGAAGTTTGG TTGCGCTTGA TCTTGGGTGA TGCTTGGTGG TTGTTGCTGA TTGGTTTGGG CTTGGCTGGT ATGTGGTCGC TGCCCTGCGA GCGTAATCTC AAGCTACTGC TCGCGGCGTG GGTTGGCTAT ACCGTGTTTA CGGCCTGCCT GTTTCATGTG GAATATCGCT ATCGTTTGCC GTTGTTGCCT GTGCTTTTGC CCGCTGCTGC TTGGCAAATC CACCAATTGC GTTGGGCTTG GCCGCGACCA CGCCAATGGT TGGCGCTGGC AACTGGCGCA AGCGTGGTAG CCTTGAGTTT GAGCTATGCC AATTATCCCC AACAGGCTTG GCGTTTAGGC CAAAAACATT GGTATTTGTG GCAGGCCGAG CGACACTTAG CTGATGCAAC CGCCTTGCCA GCTACCATGA ACGAGCAAGC CAGTTCAGGT GTGGCGATTT TTGAGGCCCA ATCAGCGGCC AGCAATGCCT TGCGCTACGA TCCTGAATCA GCATTGGCCC GGGTGTTGTT GGCGCGAATC GCCTTTGTCA GCCAGCAACC CAGCGTTGGC GCAGAGCAAT TGCGTTTGGC GATTGACTAT TTGCCAGCCC ATGCCTATGC CCATTTGTTG TTGGGCGATT ATCTGCGCCA GCAAGGCCAG CTTGAGGCGG CTAAGGCTGA GTTGACCTAC GAAACCAGTT CGACCGAAGA TCTGCAAGCA TGGTCGCGCC AACGCATGCA ATTTACGCCC ATCACCAGTA CGCTCGATTT GGGCAATGGC CTTGATTTGG GCTTGATTGA CGACTGGTAT GCTGCCGAGG ATGGCAGCCG CTGGTTTGGC GAGCAAGCCA CAGTCTGGTT ACAAGCGCCT AGCGATGCCA ATTTGTTGCG CTTGCGGATT GCTAGCCAAC GCCCAACCAG CTTGGCTTCA CCAAACTTGA GTGTCTTCGC TAATGGGCAA TTTTTAGCTG AAATCGCCAT CGACTCAGCT TGGACGAACC ATGAAATTGC TTTGCCAAAT AGTTTGCGTA GCATACCAAT AGAAATTGAA TTACGTAGTA GTAGCACCTT TGTACCACAC GATCTGGAGC CGACCAATCC CGATGGACGC GATTTAGGGC TGCGCGTCGA TTGGATTGTT GTGGAATAG
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Protein sequence | MIMRLQRSWL SFAILFGLMG LGLGLRLAAW HWHEFRPLGG DEREYLDLAI ALAQGKEYYD LQFMRPPLFP LGLAALVWLV DGDLQGLRLI NALISTATIP LVWWWARLLL RRNDLALIAA GLTAGSFTLA LNATELLSET VTLAGLMLVF GLLMLALRRP QLRWSIAAGV AIALVSLIRS VALPLLPLAL LLLWRSDNPR RWRQMLGLLA ATLLTLAPWT IRNALTYDGF ILIDTTGQEN LWLDNDPRGR DLVKAELYAM GDARIERSQL ASQQGIAAIT QNPDWFFAKV GREFWHSWGL EHSDDLLARR AIWRPASEVW LRLILGDAWW LLLIGLGLAG MWSLPCERNL KLLLAAWVGY TVFTACLFHV EYRYRLPLLP VLLPAAAWQI HQLRWAWPRP RQWLALATGA SVVALSLSYA NYPQQAWRLG QKHWYLWQAE RHLADATALP ATMNEQASSG VAIFEAQSAA SNALRYDPES ALARVLLARI AFVSQQPSVG AEQLRLAIDY LPAHAYAHLL LGDYLRQQGQ LEAAKAELTY ETSSTEDLQA WSRQRMQFTP ITSTLDLGNG LDLGLIDDWY AAEDGSRWFG EQATVWLQAP SDANLLRLRI ASQRPTSLAS PNLSVFANGQ FLAEIAIDSA WTNHEIALPN SLRSIPIEIE LRSSSTFVPH DLEPTNPDGR DLGLRVDWIV VE
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