Gene Haur_1087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1087 
Symbol 
ID5732978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp1244283 
End bp1244951 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content51% 
IMG OID641278225 
ProductTetR family transcriptional regulator 
Protein accessionYP_001543863 
Protein GI159897616 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.00014413 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAACAA CCCGACCGCG AGGCCGACCG CGTACTTTTG ATCGGCAAGC AGCGCTTGAT 
GCGGCGATGG AATTATTTTG GCGACATGGT TACGAAGGCA CATCGATTGC CGATTTGACG 
GCGGCGATGG GCTTTACGCC GCCGACCTTG TATGCAGCTT TTGGCTCAAA AGAAGATTTG 
TATCGTGAGG TGATTCAGCA TTTTTTACTG CGCAGCGAGC GCCAACGCAT GGAAGCAGCG 
CTGAATCAAA CCAGTGCCTA TGCCATGTTG CGTTACTATT TGTATGCTGC GGCTGAAAGT 
TTTACCGACC CCAGCACGCC AGCGGGCTGT ATGGTGGCGA CGGCAGCCTT ACAATGTGCG 
GTCGAAAATC AACCAATAGT TCAAGAAGTG GCGCGAATTC GACATCAGAT GTTTATTGGG 
TTTGTTGAGC GGCTTGATGT TGCGAAACGG AATCAGGAAT TACCTGAAAC GATTGATTCG 
CTGGCATTAG CCAATTTCTA CACCGCGATT GTGCAGGGTA TGTCGGTGCA AGCAATCGAT 
GGGGCCAGCA GCGCCGATTT GATTGCAGTG GCCGATCTTG CGCTGAGTGC ATGGCCAGGT 
GAAAAGTCAG AAGGCAAAAG TCAAAAGGCA AAAGTACAAA GGGATCAGGA TTCAGGGATC 
AGGGGCTAG
 
Protein sequence
MQTTRPRGRP RTFDRQAALD AAMELFWRHG YEGTSIADLT AAMGFTPPTL YAAFGSKEDL 
YREVIQHFLL RSERQRMEAA LNQTSAYAML RYYLYAAAES FTDPSTPAGC MVATAALQCA 
VENQPIVQEV ARIRHQMFIG FVERLDVAKR NQELPETIDS LALANFYTAI VQGMSVQAID 
GASSADLIAV ADLALSAWPG EKSEGKSQKA KVQRDQDSGI RG