Gene Haur_1056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1056 
Symbol 
ID5732960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp1204973 
End bp1205998 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content52% 
IMG OID641278191 
Productperiplasmic binding protein 
Protein accessionYP_001543832 
Protein GI159897585 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAAGG TTCGATTTAG CCGATTTTTG AGCGTTTTCT TGTTGTTGGG CAGCCTTGTA 
GCTTGTGACG CTGCCGAAAA TGGCGTGACC CAATTACCAG CGACAACTGT GCCGCCAACC
GCCACAACTG ATAGTGCTGC CGTAGCACCA ACCGCCGAAT TGACTCCAAC TGAAACTAGT
AGCATCAGCT ATCCTTTGAC GATCAAGGAT AGCCTCGGGC GCGAAGTAAC TCTACAAGCA
GCACCCAGCC GGATCGTCTC GTTAGCGCCA TCGAATACCG AAATTCTGTT TGCGGTTGGC
GCGGGCGATG CGTTGGTCGG CGTGACCAAA TATTGCAATT ATCCCGAAGC AGCCAAAAGC
ATCGATCAAA TTGGCGGCTT CTCGGCCAAA ACGATTAGCC TTGAAACCAT CGTTGCGCTC
AAGCCCGATG TTGTGTTTTC GGGCGATGAA AGCCAACAAA TCGTGATCGA TGCCCTCACC
CAAGCCAATA TTCCGGTGAT CGCGATCAAA GCTGAAACCT TCGAGGCGGT CTATCAAAAC
ATCAATTTGA TTGGTCAAGC GACGAATCAT CCAACTGAGG CGGCCCAAGT TGTGGCCGAG
ATGCAAGCCC GCATCGATGC AGTAACCGCC AAAACCAGCA CGCTGGCGGC TGCCGATAAA
TTAAGCGTGT TCTATGAAGT TTATGATGAG CCATTGATGA CCGCTGGCCC GCAAACCTTT
ATCGGCCAAA TGCTTGAACT CGCTGGCGCA ACCAATATTT TTGCCGATGT GAGCGAAGAG
TATCCCGAAA TCAGCGCCGA AGAAGTGGTC AATCGGCAGC CAGCGGTGAT CATCGGGCCT
GAATCGCATG GCGATAAACT GACGATTGAT CTGATCGCCC AACGCCCAGG CTGGGGTGCA
ATCAAGGCAG TCAAGGAGGG CAAGATCGTC GTTTTGAATG GTGATATGCT TTCGCGGCCA
GGCCCACGCT TGGCCGATGC CTTAGAAGCA CTGAGCCAAG CCTTGTATCC AGAATTGTTT
AACTAA
 
Protein sequence
MTKVRFSRFL SVFLLLGSLV ACDAAENGVT QLPATTVPPT ATTDSAAVAP TAELTPTETS 
SISYPLTIKD SLGREVTLQA APSRIVSLAP SNTEILFAVG AGDALVGVTK YCNYPEAAKS
IDQIGGFSAK TISLETIVAL KPDVVFSGDE SQQIVIDALT QANIPVIAIK AETFEAVYQN
INLIGQATNH PTEAAQVVAE MQARIDAVTA KTSTLAAADK LSVFYEVYDE PLMTAGPQTF
IGQMLELAGA TNIFADVSEE YPEISAEEVV NRQPAVIIGP ESHGDKLTID LIAQRPGWGA
IKAVKEGKIV VLNGDMLSRP GPRLADALEA LSQALYPELF N