Gene Haur_1015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1015 
Symbol 
ID5732919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp1159432 
End bp1161117 
Gene Length1686 bp 
Protein Length561 aa 
Translation table11 
GC content49% 
IMG OID641278150 
ProductEmrB/QacA family drug resistance transporter 
Protein accessionYP_001543791 
Protein GI159897544 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily
[TIGR00880] Multidrug resistance protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACGG CAATTAAGCA AGCGGCTTCG GCAGCAGTTG AATTTGAACA GCCACGCTAT 
ACCAAGCGCG AAACCTTGCT CACCATGTTG AGCGTGCTCT TGGTGATGCT GTTGGCCTCG
CTCGATCAAA CAATTGTGGG TACGGCGATG CCCAAAGTCA TTACCGATTT ACACGGCTTT
GATCGCTATA CCTGGGTTAC GACGGCCTAT CTGTTGGCTT CGACAGTGAT GGTGCCAATT
TATGGCAAGC TTTCGGATAT GTTCGGGCGT AAGCCGTTGT TTATCTTTGG CTTAATTGTC
TTTTTGATTG GCTCAGGCTT GTGTGGCGCG GCCCAAAGCA TGAACCAATT AATCATCTTT
CGTGGTTTGC AAGGCTTAGG TGCAGCCGCC TTAATGCCAA TTGCCTTGGC GATTGTTGGC
GATTTGTTCA CACCCCGCGA ACGCGCTCGC TGGCAAGGCA TCACTGGTGG GGTTTTTGGG
ATTTCGGCCA TCCTTGGGCC AACCGCTGGT GGCTGGTTGA CTGAACACGT TTCATGGCGC
TGGATTTTCT ACGTCAATTT GCCGTTGGGC ATTATCGCGC TTTTGACTTT AGTGTTTTTG
ATGCCAACCC TTGGCCGCAA AGCCCAACGG GTCAAAATCG ACTACATCGG CTCGATCTTG
TTGGTTGCTG GTACAGTGCC GCTGTTGCTG GGCTTTACCT GGGCTGGTTC GCAATACGCT
TGGCTTTCAG CTCAAGTTTT GAGCATGTTT GGGCTTTCGA TTGTATTTTT GGGTGCATTC
ATTGCCTTTG AAGCATGGCT TGAACGTAAC AATGGCCAGC CAATTATCGA GCCAAGCCTG
TTCAAAAATA GCATTTTCCG CATCTCGGTG TTGATCACAA TCATCTCGAA TATGGCGCTG
TTTGGCAATA TTTTCTTCTT GCCCTTGTTT GTGCAAGGCG TAATTGGCAC CTCGATTACC
AATAGTGGCC TGATTATGAC CCCGTTGATG CTAACTGCGA TTATCTGTAG CGTGGTAGCA
GGTCAAATTG TGGCAGCAAC AGGTAAATAC AAAATTATCG CAATTGTTGG TATGGCGATT
AGCGTGTTAG GCGGCTTCCT GCTGCTGCAA CTCGATATCA ATTCGACCAA TACTAATGTG
GCGATAGATA TGGTGGTGCT CGGCTTGGGT ATGGGTGCGG GGATGTCGCT GTATACCTTG
ATTACCCAAA ATGCCTTGCC CAACAAAATT GGCCAAGCCA CCTCAGCTTT GACCTTCTTC
CGCTCAATTG GCAGCACAAT TGCCTTGGCA GCGATGGGTT CGGTGATGAA TTCGGCCTAT
TTGCCAGCTT TCAAGGCGGC AATTCCAGCC GAAGTTGCCC AAAATGTGCC AGCCGAAAGT
TTGGCAGCCT TCAACAACCC GCAAATTTTG CTCTCACCCG AAACCCAATC ACTGATTCAA
GCTCAGTTTG CCCAAGGCGG CCAGCAGGGC GAAGCGCTTT ATAACACCTT GTTAGGCGCA
GTCAAATATG GCTTAGTCGA TGGCATTCAT CATGTGTTTA TCTTCAGTTT TGGCATTACG
CTTTTGGGTT TTGTGGTGGT TTTCTTCCTC AAAGAGATCG AATTGCGTGG TGGTCGCAAA
AAAGCTGAGG CCCAAATCGA ACAAACTGGC GAAGCTGGAG CGGCTGGAAT GGCGGCGTTT
CATTAA
 
Protein sequence
METAIKQAAS AAVEFEQPRY TKRETLLTML SVLLVMLLAS LDQTIVGTAM PKVITDLHGF 
DRYTWVTTAY LLASTVMVPI YGKLSDMFGR KPLFIFGLIV FLIGSGLCGA AQSMNQLIIF
RGLQGLGAAA LMPIALAIVG DLFTPRERAR WQGITGGVFG ISAILGPTAG GWLTEHVSWR
WIFYVNLPLG IIALLTLVFL MPTLGRKAQR VKIDYIGSIL LVAGTVPLLL GFTWAGSQYA
WLSAQVLSMF GLSIVFLGAF IAFEAWLERN NGQPIIEPSL FKNSIFRISV LITIISNMAL
FGNIFFLPLF VQGVIGTSIT NSGLIMTPLM LTAIICSVVA GQIVAATGKY KIIAIVGMAI
SVLGGFLLLQ LDINSTNTNV AIDMVVLGLG MGAGMSLYTL ITQNALPNKI GQATSALTFF
RSIGSTIALA AMGSVMNSAY LPAFKAAIPA EVAQNVPAES LAAFNNPQIL LSPETQSLIQ
AQFAQGGQQG EALYNTLLGA VKYGLVDGIH HVFIFSFGIT LLGFVVVFFL KEIELRGGRK
KAEAQIEQTG EAGAAGMAAF H