| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0984 |
|---|
| Symbol | |
|---|
| ID | 5732887 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 1126833 |
|---|
| End bp | 1128278 |
|---|
| Gene Length | 1446 bp |
|---|
| Protein Length | 481 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641278118 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001543760 |
|---|
| Protein GI | 159897513 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.829965 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAACA CACCCATGCC ATCACAGCAT TCCACCGTTG TCTCGCAATC CACAATTTGG
AAGGTCATCA TTGCATCGGC TTTGGGTACC ATGATTGAAT GGTACGATTT CTACATTTTT
GGCAGTCTTG CTGCGGTCAT TGCGACAAAT TTCTATCAGT CGGGCAACGA AACGGCGGCC
TTGCTGGAAA CCTTTGCCAC CTTTGGGGCG GGCTTTGCGG CGCGACCGTT CGGGGCACTG
GTGTTTGGGC GCATTGGCGA TATTGTTGGG CGCAAATATG CCTTTTTGGT CACGTTGCTG
ATCATGGGCG GCGCAACCAC GGTCATTGGG ATTTTGCCCA CCTATGCCTC AATTGGCATC
CTCGCCCCGA TCATTTTGGT GATTATTCGG ATCATCCAAG GTTTGGCGCT TGGTGGTGAA
TATGGCGGTG CGGCGGTCTA TGTCGCTGAA CATGTTCCCG ACCATAAGCG CGGTTTTTAC
ACCAGTTTTA TTCAAATTAC CGCCACGCTT GGCTTATTTA TCTCGTTGCT GGTAATTTTG
ATTGTACGAA CCTCGATGAG CAAGGCAGCC TTTGATAGCT GGGGCTGGCG GATTCCCTTC
TTGCTCTCAA TTGTCTTGGT GGGTGTTTCA GTCTACATTC GCTCGAAGAT GAGTGAATCG
CCGTTGTTTA CCAAACTCAA ACATGCAGGC AAAACCTCGA AAGCTCCGCT TAAAGATAGT
TTTGGCAATC GGCGCAATTG GAAAGTGATT TTGACGGTGT TGTTTGGAGC CGCTGCGGGT
CAAGCAGTAA TCTGGTATAC CGCTCAATTT TACGTGAACT CGTGGCTCAA AACCCAAGCC
AAAGTGCCAG CTAACACCGT TGATACAATC GTGGCGATTG CTTTGTTCTT AGGCATGCCG
TTTTTCGTCG TCATGGGAGC GCTTTCAGAT AAATGGGGGC GCAAAACGGT GATGATGGCA
GGCAATTTAA TCGGTGCAAT TGCGATTTAT CCCGCCTTTA TGGCCCTGAA AGCGGCGGCT
GGTCCAATTA CTCCGGCGGT TCTCGATGAA GCTGGAAAGG TTATCACGCC TGCGGTCGCC
AACAATCCTA ACACCGTTCT ACTCACCTTG ATCATTTTTG GGTTGGTGTT GTGTGTTTGT
ATGGTGTATG GCCCGATTGC GGCCTTTTTG GTGGAATCGT TTCCTGCCAA AATTCGCTAT
ACCTCGGTTT CACTGCCCTA TCATGTTGGC AACGGCTACT TTGGCGGTTG GTTGCCCTTT
ATCGCCACAG CAGTGGTTAG TAGTACCGGC AATATCTATG CTGGCCTATG GTTTCCAATT
GCCATCGCTT TGTTGACCTT TGTGGTTGGG ATGGTCTTGC TCAAGGAAAC CAAGGATAAT
TCGCTGCATG AAGAGGCTAG CGATAACCCA ATGGCGACTG AAATGGATTT AATTGCCCAA
TCATAA
|
|---|
| Protein sequence | MSNTPMPSQH STVVSQSTIW KVIIASALGT MIEWYDFYIF GSLAAVIATN FYQSGNETAA
LLETFATFGA GFAARPFGAL VFGRIGDIVG RKYAFLVTLL IMGGATTVIG ILPTYASIGI
LAPIILVIIR IIQGLALGGE YGGAAVYVAE HVPDHKRGFY TSFIQITATL GLFISLLVIL
IVRTSMSKAA FDSWGWRIPF LLSIVLVGVS VYIRSKMSES PLFTKLKHAG KTSKAPLKDS
FGNRRNWKVI LTVLFGAAAG QAVIWYTAQF YVNSWLKTQA KVPANTVDTI VAIALFLGMP
FFVVMGALSD KWGRKTVMMA GNLIGAIAIY PAFMALKAAA GPITPAVLDE AGKVITPAVA
NNPNTVLLTL IIFGLVLCVC MVYGPIAAFL VESFPAKIRY TSVSLPYHVG NGYFGGWLPF
IATAVVSSTG NIYAGLWFPI AIALLTFVVG MVLLKETKDN SLHEEASDNP MATEMDLIAQ
S
|
|---|
| |