| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0895 |
|---|
| Symbol | |
|---|
| ID | 5732796 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 1022779 |
|---|
| End bp | 1023924 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641278027 |
|---|
| Product | phosphoribosylaminoimidazole carboxylase, ATPase subunit |
|---|
| Protein accession | YP_001543671 |
|---|
| Protein GI | 159897424 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0026] Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) |
|---|
| TIGRFAM ID | [TIGR01161] phosphoribosylaminoimidazole carboxylase, PurK protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.196503 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAAAC GTTTAGGAAT TCTTGGTGGC GGCCAATTGG CGCGGATGTT GGTGCAAGCG
GCGATTCCCT TGGGAATTGA AACCGTGGTT TTGGCCAACC GCAACGATGA GCCAGCGGCA
TTGGTCAGCA AAGCGGTGGT TGGCGAGTGG AGTGATCGAG CCTTGCTTGA TCAATTTGCT
CAAGCGGTTG ATGTGGTAGT GCTGGAAAAC GAGTTTATTG GCTCGGAAAA ATTGGCCTAC
CTTGCCAGCA AAGGCGTGCA ACTTGTCCCC GATCAGGCAA CGCTGGGCTT GATTGAGGAT
AAAGCGCAAC AAAAATTAAC ATTGGCAGCC GCAGGCCTGC CTGTACCAGC CTTGGCCTTA
ATCGAATCGT TGGACGATGT GGCGGCCTTT GGGGCTGAAC ATGGTTTCCC GTTGATGCTG
AAAACGCGGC GCAACGGCTA CGATGGCCGT GGCACGGCCA AAATCCGCAG CGCCGAAGAG
ATTGCCAGCG CTTGTAGCTC CTTGGGTTTT CCCGAAAATC CAGTGTTTGT TGAGGCATGG
GTTCCCTTCG AAGCCGAGTT GGCAACCTTG ATTATTCGCT CGGTCAGCGG CGAACAATGC
GTCTATCCAG TGATTGAAAC CTACCAACCG AGCGGCGTTT GTCGGGTGGT GCGTGCACCA
GCACCCTTCT CAGCAGCAAT TCAACAACAG GCCAGCGAGG TTGCTCAAGC GACGGCAGCA
GCGCTTGGTG GCTTAGGCAT CTTGGCGGTT GAAATGTTTC TGACCAGCAA GGGCCAAATT
TTGGTCAATG AGCTAGCGCC CCGTCCACAC AACACTGGTC ACTATTCAAT TGAGGGTTGT
TATTGTTCAC AATTTGAAAA TACGATTCGT GCTGCGCTGG GCTGGCCGTT GGGTGATCCT
CAGTTGCGCC ACCAAAGTGC CGTGATGGTC AATGTGCTCG CGCCAACCAC ACGACCACTT
GAAAGCAGCT TGATTCAAAC GGCGCTCAAA CCACAGGTGC ATGTGCATTG GTACGACAAA
CGCAGCGCCA AGCCAGGCCG TAAAATTGGC CATATCACCG CTGTAGGAGC CGAACCAAGC
GAAGTCGAAG CGCGTGCCCA AGCCGCCGTC GATCAGCTAG AGCGGGTTTT AGCTGAACCC
GTATAA
|
|---|
| Protein sequence | MTKRLGILGG GQLARMLVQA AIPLGIETVV LANRNDEPAA LVSKAVVGEW SDRALLDQFA
QAVDVVVLEN EFIGSEKLAY LASKGVQLVP DQATLGLIED KAQQKLTLAA AGLPVPALAL
IESLDDVAAF GAEHGFPLML KTRRNGYDGR GTAKIRSAEE IASACSSLGF PENPVFVEAW
VPFEAELATL IIRSVSGEQC VYPVIETYQP SGVCRVVRAP APFSAAIQQQ ASEVAQATAA
ALGGLGILAV EMFLTSKGQI LVNELAPRPH NTGHYSIEGC YCSQFENTIR AALGWPLGDP
QLRHQSAVMV NVLAPTTRPL ESSLIQTALK PQVHVHWYDK RSAKPGRKIG HITAVGAEPS
EVEARAQAAV DQLERVLAEP V
|
|---|
| |