Gene Haur_0890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0890 
Symbol 
ID5732791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp1016995 
End bp1018347 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content52% 
IMG OID641278022 
Productextracellular solute-binding protein 
Protein accessionYP_001543666 
Protein GI159897419 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.315589 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACCGTA AGCCATCTCA GCCACCCCGC ACAGTTCGTA GCCTTGGATT CAGTTTGATC 
GTTCTGCTGA TCTTGGCTGC CTGTGGTCAA GCAGCCACGC CACCAACCCA AATCAACCCA
ACCAGCTTGC CCACCGATAC ACCGCCAACC GCCGTGCCAG CCCTCGCCAA CTCGGCAGAT
AAGGCCTTGG TTATTTGGTC AACTGGCTCA GAGGTCGAGG CACTTTCAAT TCAAGCAGCA
GCAGATATCT TTGTGCAGAA AAATCCTGGG GTCTTGATTA AAGTTCAAGC CTTGCCCTGG
AGCGATGCTC ATACCCAAAT TCTTGAGGCC ATCGCCGCCG ATCGCGGGCC AGATCTGATG
GCTGGCGGTA TGTCATGGGG CATCGAGTTT GGCAAATTGG GTGGCATGAT CGATCTGCAA
AAGGCCTATC CCGATGTGGT AAGCGATGTT AAGCAAAAGA TGTTGCCGCA ACTCCAAGAT
TCATTGTTCT TGGATACAGG CGAGGTCTAT GCATTACAAC TCGATGTGGC ATTGATGGGG
ATGTTCTATC GCACTGATTT GCTGCGCGAT TTAGTCGGCA TGCAACAAGC TCCCCAAAAC
TGGACTGAAC TGACCAAAGT GCTAGAAAAA GCCCGCACGA TCAATAAAAA AGGCTTTGCG
ATTGGCTGGG ATAACGCTGG CTGGATCAGC TACTTTACCT TTTTATATTC AGCTGGTGGC
AGTTTATATA ACGACGATTG CTCCAAAGCC ACAATCAACT CGGCGGCTGG CTTACAAGCT
CTGACCTACT TCCGCGATCT CTACACCAAA TATCAAATTC CCACCGATAC TGCCTTGGAT
ATTGAAGGCG GCCTCGAAAG CGGCGATTAT CTAGTGAGCT ATGCTGGCAC TTGGACGGTT
GCAGCACTGG AATTCAATCG GCCTGAGTTG GCGGGCAAAT GGGCCTTGGC TCCGCTGCCC
AAAAGCCCCA AAGGCCAAAG TGTTGCGTTC CTTGGAGGGC GGGTCATCGG CGTGATGGAA
GCTTCGCAGA ACAAAGATCT GGCTGCCGAA TTTATTCGCT TTTTGTATAC CGAAGAAGCG
GTTGCCGCCC AATCGGCCTA TGCACAAAGT GCCAGTAACT ATTATGTGCC GCCAAGTTTG
CCCTTGCTCA GCGCCGCCAA ATTGCCAACC CATATCGAAG CTGGCTTCCG TGGCTTGTTG
GAGCAATCGG CAGGCCCGCC CAAGTGCGTC GGCTGGGAAG AAAGCACCAC CGATGTCCAA
AAATTATTGC AAGAAGTCGT CTACAACAAT GCTGATCCCC AAGATGCTTT AGATCAAGCA
GCGGAGATCA TGAATCGCAA TTTACAACCA TAG
 
Protein sequence
MHRKPSQPPR TVRSLGFSLI VLLILAACGQ AATPPTQINP TSLPTDTPPT AVPALANSAD 
KALVIWSTGS EVEALSIQAA ADIFVQKNPG VLIKVQALPW SDAHTQILEA IAADRGPDLM
AGGMSWGIEF GKLGGMIDLQ KAYPDVVSDV KQKMLPQLQD SLFLDTGEVY ALQLDVALMG
MFYRTDLLRD LVGMQQAPQN WTELTKVLEK ARTINKKGFA IGWDNAGWIS YFTFLYSAGG
SLYNDDCSKA TINSAAGLQA LTYFRDLYTK YQIPTDTALD IEGGLESGDY LVSYAGTWTV
AALEFNRPEL AGKWALAPLP KSPKGQSVAF LGGRVIGVME ASQNKDLAAE FIRFLYTEEA
VAAQSAYAQS ASNYYVPPSL PLLSAAKLPT HIEAGFRGLL EQSAGPPKCV GWEESTTDVQ
KLLQEVVYNN ADPQDALDQA AEIMNRNLQP