Gene Haur_0859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0859 
Symbol 
ID5732760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp972259 
End bp973710 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content52% 
IMG OID641277991 
ProductRicin B lectin 
Protein accessionYP_001543635 
Protein GI159897388 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCCT CACGGTTTAT GTGGATTTTT GCGTTACTTG TTCTTTTTGG TAGTTCTCTT 
CCCTCAACCC AAGCTCAATC GCGCAAAGAC GGCGCGGTTG AACAGGCTGA CGATACCCTG
CCCGTCAACG ACCCCGAACG CGGCATGATC TACGATGGCT TGACTCCAGC GAAAACTGGT
CCGTGTGCTG GCATGTATGA AGTTAAAGTT GGCGACCAAA TCTTCTGTAG CCACGGCCCC
GACCCAATCG CCAAAGGCAA ATCGGTTAAA GACGAAACCT TGCCGCTCGA AAAGGCCGCA
ATCAACCCAA TGATCGTCTG TAACGGCGAT GGCCACGCTG GTAACCGCAC CCAAGTGATG
TATGTGCGGG CTTCCGACCG ACCTGATCGT TTCAACCAAT TTGTTGGTTC GATTCGCCAA
TGGTCATCGG ATATGGATCG GATCTATCAA ACTAGTGCCC AAGAAACTGG CGGCTTCCGC
GCGGTCAACT TCGTCACCAA CAATTGTGAA ATTTACGTGA TGAATGTGGT CGTGCCAGCC
GATGGCGACG ATTCAATCGA CAAAACTGCC AATGCTTTGA AAGCCCTCGG CCACAATCGC
GCCGACCGCA AATATTTGAC CTTCGTCGAT AACAACATTT TGTGTGGCGT AGCCTTCTAC
ATGCTCGATG ATCGCCCCGA CCAAAATAAC GCCAATAACT TCGGCCCTGG CTTTGCACGT
ATGGATAACG GCTGCTGGAA CGGCGCAACC GCTGCTCACG AACATATGCA CACGATGGGT
GCAGTCCAAC GCTCGGCTCC CAATAGCACC GCCTATGGTC ACTGTATCGA TGATGAAGAT
ATTATGTGCT ACGTTGACGG CCCAGGCACG CCACCAATGC AAAATCGCTG TGGTGCCAGC
CAATATGGCC GCTTCGATTG TAACCACGAC GATTATTTCC ACACCAATCC GCCAGCAGGC
AGCTACTTGG CAACCAAATG GAACTCGGCC AACAATAAGT TCTTGTTGAA GCAAGCACCT
GGCGCAACCT ACTATCGGGT GCGCAACCGA GCAACCAACA AGTGTATCGA TGTTGCCGAG
GGTGGCAACC CCGCTAATGG CACGGTCATT CTGCAATGGG ATTGCCACAA CGGCTACAAT
CAACAATGGC AATTGATTTC GACCGACAAT GGTTTTGTGC GCTTCGTCTC ACGCGCCACC
GGCAAGGTAA TGGATGTAAG TGCCGCCTCG ACCAGCGATG GAGCCAAAAT CCATCAATGG
GAATGGGTCG GCGGTGCCAA CCAACAATGG CGCATCAATA ATCTTGGCAA TGGCTATTCA
ACCATTACAG CTCGCCACAG TGGGTTAGCG GTTGATATTC CATGGTGCGA TGCAGCCAGC
GGCGTGCAAT TGCAGCAAGT CAATCCAACC AACAACGATT GTCAATCATT TGTATTTGAG
CCAATGCAAT AA
 
Protein sequence
MKPSRFMWIF ALLVLFGSSL PSTQAQSRKD GAVEQADDTL PVNDPERGMI YDGLTPAKTG 
PCAGMYEVKV GDQIFCSHGP DPIAKGKSVK DETLPLEKAA INPMIVCNGD GHAGNRTQVM
YVRASDRPDR FNQFVGSIRQ WSSDMDRIYQ TSAQETGGFR AVNFVTNNCE IYVMNVVVPA
DGDDSIDKTA NALKALGHNR ADRKYLTFVD NNILCGVAFY MLDDRPDQNN ANNFGPGFAR
MDNGCWNGAT AAHEHMHTMG AVQRSAPNST AYGHCIDDED IMCYVDGPGT PPMQNRCGAS
QYGRFDCNHD DYFHTNPPAG SYLATKWNSA NNKFLLKQAP GATYYRVRNR ATNKCIDVAE
GGNPANGTVI LQWDCHNGYN QQWQLISTDN GFVRFVSRAT GKVMDVSAAS TSDGAKIHQW
EWVGGANQQW RINNLGNGYS TITARHSGLA VDIPWCDAAS GVQLQQVNPT NNDCQSFVFE
PMQ