Gene Haur_0804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0804 
Symbol 
ID5732704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp908797 
End bp909507 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content51% 
IMG OID641277935 
Producttwo component transcriptional regulator 
Protein accessionYP_001543580 
Protein GI159897333 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.324741 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCACAA TATTGCTTGT AGAAGATGAA GCCCTGCTCG CCGATACGCT CCGTTACAAC 
CTTGAACGCG AAGGCTACAC CGTGCTTTCT GCTTCCGATG GAGTTACCGG GCTGGATTTA
GCCCGCGCCG AACAGCCCGA TTTGCTGATT TTAGATGTGA TGTTGCCCAA ACTCGACGGC
TTTTCAGTCT GTCGAATTTT ACGGCGTGAA ACCAATATCC CGATTATGAT GCTGACTGCC
CGCCAAGATG AAGTTGATCG GATCGCTGGC TTGGAATTGG GCGCTGATGA TTATGTGATT
AAGCCATTTA GCCTTGGTGA ATTACTGGCC CGCGTTCGAG CGATTTTGCG TCGTACCGAC
CGCCAACCAA CCGGAGTTGA ACGCGAATTG CTGACCGCCG CCAATCTTAA GGTCGATACT
GGCAGTCGTC GGGTGTTTCG TGATAACAAC GAAATTACGC TCGCTCAGAA GGAATTCGAC
TTGTTGGTGT GTTTGATGCG CAACCGTGGC ATGGCGCTTT CGCGCGATTT GCTGCTCGAA
CGAGTTTGGG GTTACGATTT TCCAGGCGAT TCGCGCACGG TCGATGTGCA TGTGCGTTGG
CTGCGTGAGA AAGTTGAAGT AGACCCCAGC AACCCAATTT ATATTCAAAC TGTGCGTGGG
ATTGGCTATC GTTTTAATGA TCAACTTAGC CGTAGCGAGC GCAAAAACTA A
 
Protein sequence
MSTILLVEDE ALLADTLRYN LEREGYTVLS ASDGVTGLDL ARAEQPDLLI LDVMLPKLDG 
FSVCRILRRE TNIPIMMLTA RQDEVDRIAG LELGADDYVI KPFSLGELLA RVRAILRRTD
RQPTGVEREL LTAANLKVDT GSRRVFRDNN EITLAQKEFD LLVCLMRNRG MALSRDLLLE
RVWGYDFPGD SRTVDVHVRW LREKVEVDPS NPIYIQTVRG IGYRFNDQLS RSERKN